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We analyze pattern formation on a network of cells where each cell inhibits its neighbors through cell-to-cell contact signaling. The network is modeled as an interconnection of identical dynamical subsystems each of which represents the…

Dynamical Systems · Mathematics 2014-07-25 Ana S. Rufino Ferreira , Murat Arcak

We study a simple map as a minimal model of excitable cells. The map has two fast variables which mimic the behavior of class I neurons, undergoing a sub-critical Hopf bifurcation. Adding a third slow variable allows the system to present…

Neurons and Cognition · Quantitative Biology 2007-05-23 M. Copelli , M. H. R. Tragtenberg , O. Kinouchi

We disclose the generality of the intrinsic mechanisms underlying multistability in reciprocally inhibitory 3-cell circuits composed of simplified, low-dimensional models of oscillatory neurons, as opposed to those of a detailed Hodgkin-…

Adaptation and Self-Organizing Systems · Physics 2020-08-26 J. Collens , K. Pusuluri , A. Kelly , D. Knapper , T. Xing , S. Basodi , D. Alacam , A. L. Shilnikov

We show that it is possible to learn protocols that effect fast and efficient state-to-state transformations in simulation models of active particles. By encoding the protocol in the form of a neural network we use evolutionary methods to…

Statistical Mechanics · Physics 2024-03-29 Corneel Casert , Stephen Whitelam

We give a constructive method for realizing an arbitrary directed graph (with no one-cycles) as a heteroclinic or an excitable dynamic network in the phase space of a system of coupled cells of two types. In each case, the system is…

Adaptation and Self-Organizing Systems · Physics 2015-12-17 Peter Ashwin , Claire Postlethwaite

Many natural and man-made network systems need to maintain certain patterns, such as working at equilibria or limit cycles, to function properly. Thus, the ability to stabilize such patterns is crucial. Most of the existing studies on…

Optimization and Control · Mathematics 2025-09-30 Alberto Maria Nobili , Yuzhen Qin , Carlo Alberto Avizzano , Danielle S. Bassett , Fabio Pasqualetti

The time elapsed model describes the firing activity of an homogeneous assembly of neurons thanks to the distribution of times elapsed since the last discharge. It gives a mathematical description of the probability density of neurons…

Analysis of PDEs · Mathematics 2011-09-16 Khashayar Pakdaman , Benoît Perthame , Delphine Salort

We study the steady state of driven elastic strings in disordered media below the depinning threshold. In the low-temperature limit, for a fixed sample, the steady state is dominated by a single configuration, which we determine exactly…

Disordered Systems and Neural Networks · Physics 2009-05-29 Alejandro B. Kolton , Alberto Rosso , Thierry Giamarchi , Werner Krauth

Dynamical balance of excitation and inhibition is usually invoked to explain the irregular low firing activity observed in the cortex. We propose a robust nonlinear balancing mechanism for a random network of spiking neurons, which works…

Disordered Systems and Neural Networks · Physics 2025-05-29 Antonio Politi , Alessandro Torcini

Cortical neurons emit seemingly erratic trains of action potentials or "spikes," and neural network dynamics emerge from the coordinated spiking activity within neural circuits. These rich dynamics manifest themselves in a variety of…

Neurons and Cognition · Quantitative Biology 2022-04-01 Braden A. W. Brinkman , Han Yan , Arianna Maffei , Il Memming Park , Alfredo Fontanini , Jin Wang , Giancarlo La Camera

Complex coherent dynamics is present in a wide variety of neural systems. A typical example is the voltage transitions between up and down states observed in cortical areas in the brain. In this work, we study this phenomenon via a…

Neurons and Cognition · Quantitative Biology 2015-05-19 Jorge F. Mejias , Hilbert J. Kappen , Joaquin J. Torres

We present an example of the practical implementation of a protocol for experimental bifurcation detection based on on-line identification and feedback control ideas. The idea is to couple the experiment with an on-line computer-assisted…

Chaotic Dynamics · Physics 2009-11-07 R. Rico-Martinez , K. Krischer , G. Flaetgen , J. S. Anderson , I. G. Kevrekidis

Experimental continuation encompasses a set of methods that combine control and continuation to obtain the full bifurcation diagram of a nonlinear system experimentally, including responses that would be unstable in the system without…

Dynamical Systems · Mathematics 2025-06-24 Ghislain Raze , Gaëtan Abeloos , Gaëtan Kerschen

The neural dynamics of the nematode C. elegans are experimentally low-dimensional and correspond to discrete behavioral states, where previous modeling work has found neural proxies for some of these states. Experimental results further…

Neurons and Cognition · Quantitative Biology 2015-09-04 James Kunert , Eli Shlizerman , Andrew Walker , J. Nathan Kutz

We implement a computer-assisted approach that, under appropriate conditions, allows the bifurcation analysis of the coarse dynamic behavior of microscopic simulators without requiring the explicit derivation of closed macroscopic equations…

Pattern Formation and Solitons · Physics 2009-11-07 Alexei G. Makeev , Dimitrios Maroudas , Ioannis G. Kevrekidis

We perform one and two-parameter numerical bifurcation analysis of a mechanotransduction model approximating the dynamics of mesenchymal stem cell differentiation into neurons, adipocytes, myocytes and osteoblasts. For our analysis, we use…

Cell Behavior · Quantitative Biology 2023-03-16 Katiana Kontolati , Constantinos Siettos

Analytical equations were found for interdigitated electrodes, which considered reversible electrode reactions and pure diffusion within confined spaces. A conformal transformation, obtained by the use of Jacobian elliptic functions, was…

Chemical Physics · Physics 2019-03-08 Cristian F. Guajardo Yévenes , Werasak Surareungchai

The elapsed-time model describes the behavior of interconnected neurons through the time since their last spike. It is an age-structured non-linear equation in which age corresponds to the elapsed time since the last discharge, and models…

Dynamical Systems · Mathematics 2025-04-28 María J. Cáceres , José A Cañizo , Nicolas Torres

The experimental study of neural networks requires simultaneous measurements of a massive number of neurons, while monitoring properties of the connectivity, synaptic strengths and delays. Current technological barriers make such a mission…

Neurons and Cognition · Quantitative Biology 2016-01-12 Amir Goldental , Pinhas Sabo , Shira Sardi , Roni Vardi , Ido Kanter

Simultaneous recordings from many neurons hide important information and the connections characterizing the network remain generally undiscovered despite the progresses of statistical and machine learning techniques. Discerning the presence…

Applications · Statistics 2019-03-21 Pietro Verzelli , Laura Sacerdote
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