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Dependency solving is a hard (NP-complete) problem in all non-trivial component models due to either mutually incompatible versions of the same packages or explicitly declared package conflicts. As such, software upgrade planning needs to…

Software Engineering · Computer Science 2020-11-17 Pietro Abate , Roberto Di Cosmo , Georgios Gousios , Stefano Zacchiroli

Research data are often released upon journal publication to enable result verification and reproducibility. For that reason, research dissemination infrastructures typically support diverse datasets coming from numerous disciplines, from…

Digital Libraries · Computer Science 2023-05-29 Ana Trisovic

The README file serves as a critical source of information for gaining an overview and helping developers onboard to an Open Source Software (OSS) project. Yet, documentation issues persist; in particular, ``outdated'' documentation is…

Software Engineering · Computer Science 2026-03-03 Haoyu Gao , Hong Yi Lin , Christoph Treude , Gregory Gay , Mansooreh Zahedi

Large-scale data sets on scholarly publications are the basis for a variety of bibliometric analyses and natural language processing (NLP) applications. Especially data sets derived from publication's full-text have recently gained…

Digital Libraries · Computer Science 2023-11-06 Tarek Saier , Johan Krause , Michael Färber

Where can we find malware source code? This question is motivated by a real need: there is a dearth of malware source code, which impedes various types of security research. Our work is driven by the following insight: public archives, like…

Cryptography and Security · Computer Science 2020-06-01 Md Omar Faruk Rokon , Risul Islam , Ahmad Darki , Vagelis E. Papalexakis , Michalis Faloutsos

The number of open source software projects has been growing exponentially. The major online software repository host, GitHub, has accumulated tens of millions of publicly available Git version-controlled repositories. Although the research…

Software Engineering · Computer Science 2018-03-28 Vadim Markovtsev , Waren Long

As modern software development increasingly relies on reusable libraries and components, managing dependencies has become critical for ensuring software stability and security. However, challenges such as outdated dependencies, missed…

Software Engineering · Computer Science 2025-04-01 Barisha Chowdhury , Md Fazle Rabbi , S. M. Mahedy Hasan , Minhaz F. Zibran

Persistent Memory (PM) technologies enable program recovery to a consistent state in a case of failure. To ensure this crash-consistent behavior, programs need to enforce persist ordering by employing mechanisms, such as logging and…

Computational Engineering, Finance, and Science · Computer Science 2023-04-03 Yasas Seneviratne , Korakit Seemakhupt , Sihang Liu , Samira Khan

Language-based ecosystems (LBE), i.e., software ecosystems based on a single programming language, are very common. Examples include the npm ecosystem for JavaScript, and PyPI for Python. These environments encourage code reuse between…

Cryptography and Security · Computer Science 2021-12-01 Ruturaj K. Vaidya , Lorenzo De Carli , Drew Davidson , Vaibhav Rastogi

The popularity of Python has risen rapidly over the past 15 years. It is a major language in some of the most exciting technologies today. This popularity has led to a large ecosystem of third-party packages available via the pip package…

Cryptography and Security · Computer Science 2021-02-15 Aadesh Bagmar , Josiah Wedgwood , Dave Levin , Jim Purtilo

This paper presents results from the MSR 2021 Hackathon. Our team investigates files/projects that contain known security vulnerabilities and how widespread they are throughout repositories in open source software. These security…

Software Engineering · Computer Science 2021-03-24 David Reid , Kalvin Eng , Chris Bogart , Adam Tutko

Source code repositories allow developers to manage multiple versions (or branches) of a software system. Pull-requests are used to modify a branch, and backporting is a regular activity used to port changes from a current development…

Software Engineering · Computer Science 2022-04-11 Debasish Chakroborti , Kevin A. Schneider , Chanchal K. Roy

Developers rely on open-source packages and must review dependencies to safeguard against vulnerable or malicious upstream code. A careful review of all dependencies changes often does not occur in practice. Therefore, developers need…

Software Engineering · Computer Science 2025-07-24 Sivana Hamer , Nasif Imtiaz , Mahzabin Tamanna , Preya Shabrina , Laurie Williams

Background: Modern software uses many third-party libraries and frameworks as dependencies. Known vulnerabilities in these dependencies are a potential security risk. Software composition analysis (SCA) tools, therefore, are being…

Software Engineering · Computer Science 2021-09-02 Nasif Imtiaz , Seaver Thorne , Laurie Williams

In Open Source Software, resources of any project are open for reuse by introducing dependencies or copying the resource itself. In contrast to dependency-based reuse, the infrastructure to systematically support copy-based reuse appears to…

Software Engineering · Computer Science 2025-01-30 Mahmoud Jahanshahi , David Reid , Audris Mockus

Open-source libraries are widely used by software developers to speed up the development of products, however, they can introduce security vulnerabilities, leading to incidents like Log4Shell. With the expanding usage of open-source…

Dependency hell is a well-known pain point in the development of large software projects and machine learning (ML) code bases are not immune from it. In fact, ML applications suffer from an additional form, namely, "data source dependency…

Software Engineering · Computer Science 2022-12-16 Laurent Boué , Pratap Kunireddy , Pavle Subotić

Third-party dependency updates can cause a build to fail if the new dependency version introduces a change that is incompatible with the usage: this is called a breaking dependency update. Research on breaking dependency updates is active,…

Software Engineering · Computer Science 2024-03-21 Frank Reyes , Yogya Gamage , Gabriel Skoglund , Benoit Baudry , Martin Monperrus

Foundation models (e.g. ChatGPT, StableDiffusion) pervasively influence society, warranting immediate social attention. While the models themselves garner much attention, to accurately characterize their impact, we must consider the broader…

Machine Learning · Computer Science 2024-07-19 Rishi Bommasani , Dilara Soylu , Thomas I. Liao , Kathleen A. Creel , Percy Liang

a) Context: In many programming language ecosystems, developers rely more and more on external open source dependencies, made available through package managers. Key ecosystem packages that go unmaintained create a health risk for the…

Software Engineering · Computer Science 2021-08-18 Théo Zimmermann , Jean-Rémy Falleri