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Precise 3D segmentation of cerebral vasculature from T1-weighted contrast-enhanced (T1CE) MRI is crucial for safe neurosurgical planning. Manual delineation is time-consuming and prone to inter-observer variability, while current automated…

Computer Vision and Pattern Recognition · Computer Science 2025-11-25 Mohammad Jafari Vayeghan , Niloufar Delfan , Mehdi Tale Masouleh , Mansour Parvaresh Rizi , Behzad Moshiri

Automated segmentation of retinal blood vessels in label-free fundus images entails a pivotal role in computed aided diagnosis of ophthalmic pathologies, viz., diabetic retinopathy, hypertensive disorders and cardiovascular diseases. The…

Computer Vision and Pattern Recognition · Computer Science 2016-11-17 Avisek Lahiri , Abhijit Guha Roy , Debdoot Sheet , Prabir Kumar Biswas

Protein function is inherently linked to its localization within the cell, and fluorescent microscopy data is an indispensable resource for learning representations of proteins. Despite major developments in molecular representation…

Quantitative Methods · Quantitative Biology 2022-05-25 Anastasia Razdaibiedina , Alexander Brechalov

Curvilinear structures, which include line-like continuous objects, are fundamental geometrical elements in image-based applications. Reconstructing these structures from images constitutes a pivotal research area in computer vision.…

Computer Vision and Pattern Recognition · Computer Science 2024-05-07 Chao Liu , Ting Zhao , Nenggan Zheng

Geometric trees are characterized by their tree-structured layout and spatially constrained nodes and edges, which significantly impacts their topological attributes. This inherent hierarchical structure plays a crucial role in domains such…

Machine Learning · Computer Science 2024-08-19 Zheng Zhang , Allen Zhang , Ruth Nelson , Giorgio Ascoli , Liang Zhao

The determination of a coronary stenosis and its severity in current clinical workflow is typically accomplished manually via physician visual assessment (PVA) during invasive coronary angiography. While PVA has shown large inter-rater…

Computer Vision and Pattern Recognition · Computer Science 2018-07-30 Benjamin Au , Uri Shaham , Sanket Dhruva , Georgios Bouras , Ecaterina Cristea , Alexandra Lansky MD , Andreas Coppi , Fred Warner , Shu-Xia Li , Harlan Krumholz

Despite their great success in practical applications, there is still a lack of theoretical and systematic methods to analyze deep neural networks. In this paper, we illustrate an advanced information theoretic methodology to understand the…

Machine Learning · Computer Science 2019-05-09 Shujian Yu , Jose C. Principe

Tunnel lining crack is a crucial indicator of tunnels' safety status. Aiming to classify and segment tunnel cracks with enhanced accuracy and efficiency, this study proposes a two-step deep learning-based method. An automatic tunnel image…

Computer Vision and Pattern Recognition · Computer Science 2025-07-21 Yong Feng , Xiaolei Zhang , Shijin Feng , Yong Zhao , Yihan Chen

The diffusion of minimally invasive, endovascular interventions motivates the development of visualization methods for complex vascular networks. We propose a planar representation of blood vessel trees which preserves the properties that…

Image and Video Processing · Electrical Eng. & Systems 2025-10-23 Guillaume Houry , Tom Boeken , Stéphanie Allassonnière , Jean Feydy

Vascular networks play a crucial role in understanding brain functionalities. Brain integrity and function, neuronal activity and plasticity, which are crucial for learning, are actively modulated by their local environments, specifically…

Neurons and Cognition · Quantitative Biology 2024-02-28 Jiachen Yao , Nina Hagemann , Qiaojie Xiong , Jianxu Chen , Dirk M. Hermann , Chao Chen

The use of International Classification of Diseases (ICD) codes in healthcare presents a challenge in selecting relevant codes as features for machine learning models due to this system's large number of codes. In this study, we compared…

Machine Learning · Computer Science 2024-10-29 Peyman Ghasemi , Joon Lee

Deep neural networks yield promising results in a wide range of computer vision applications, including landmark detection. A major challenge for accurate anatomical landmark detection in volumetric images such as clinical CT scans is that…

Computer Vision and Pattern Recognition · Computer Science 2021-12-15 Tianyu Ma , Ajay Gupta , Mert R. Sabuncu

Medical image segmentation is a pivotal task within the realms of medical image analysis and computer vision. While current methods have shown promise in accurately segmenting major regions of interest, the precise segmentation of boundary…

Image and Video Processing · Electrical Eng. & Systems 2025-05-09 Yi Lin , Dong Zhang , Xiao Fang , Yufan Chen , Kwang-Ting Cheng , Hao Chen

Automatic segmentation of retinal blood vessels from fundus images plays an important role in the computer aided diagnosis of retinal diseases. The task of blood vessel segmentation is challenging due to the extreme variations in morphology…

Computer Vision and Pattern Recognition · Computer Science 2016-11-17 Avijit Dasgupta , Sonam Singh

Background: Coronary Artery Disease (CAD) is one of the leading causes of death worldwide. Invasive Coronary Angiography (ICA), regarded as the gold standard for CAD diagnosis, necessitates precise vessel segmentation and stenosis…

Computer Vision and Pattern Recognition · Computer Science 2025-09-15 Nan Mu , Ruiqi Song , Zhihui Xu , Jingfeng Jiang , Chen Zhao

Coronary artery disease (CAD) is a leading cause of cardiovascular-related mortality, and accurate stenosis detection is crucial for effective clinical decision-making. Coronary angiography remains the gold standard for diagnosing CAD, but…

Image and Video Processing · Electrical Eng. & Systems 2025-03-25 Baixiang Huang , Yu Luo , Guangyu Wei , Songyan He , Yushuang Shao , Xueying Zeng

The geometry of the retinal vessel is a key biomarker of vascular diseases, yet clinical evidence remains primarily observational. Existing generative counterfactuals intervene only at the image-level disease label, failing to isolate…

Image and Video Processing · Electrical Eng. & Systems 2026-05-14 Tan Su , Ethan Elio Meidinger , Lin Gu , Ruogu Fang

Deep learning motivated by convolutional neural networks has been highly successful in a range of medical imaging problems like image classification, image segmentation, image synthesis etc. However for validation and interpretability, not…

Image and Video Processing · Electrical Eng. & Systems 2024-08-19 Abhinav Sagar

Segmentation of tubular structures in vascular imaging is a well studied task, although it is rare that we try to infuse knowledge of the tree-like structure of the regions to be detected. Our work focuses on detecting the important…

Computer Vision and Pattern Recognition · Computer Science 2024-10-28 Théo Bertrand , Laurent D. Cohen

Blood vessel segmentation is one of the most studied topics in computer vision, due to its relevance in daily clinical practice. Despite the evolution the field has been facing, especially after the dawn of deep learning, important…

Image and Video Processing · Electrical Eng. & Systems 2021-08-02 R. J. Araújo , J. S. Cardoso , H. P. Oliveira