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Trajectory generation is an important task in movement studies; it circumvents the privacy, ethical, and technical challenges of collecting real trajectories from the target population. In particular, real trajectories in the wildlife…

Machine Learning · Computer Science 2025-02-11 Ali Al-Lawati , Elsayed Eshra , Prasenjit Mitra

fgivenx is a Python package for functional posterior plotting, currently used in astronomy, but will be of use to scientists performing any Bayesian analysis which has predictive posteriors that are functions. The source code for fgivenx is…

Instrumentation and Methods for Astrophysics · Physics 2019-08-06 Will Handley

Structural Equation Modeling (SEM) is an umbrella term that includes numerous multivariate statistical techniques that are employed throughout a plethora of research areas, ranging from social to natural sciences. Until recently, SEM…

Applications · Statistics 2021-06-10 Georgy Meshcheryakov , Anna A. Igolkina , Maria G. Samsonova

The direpack package aims to establish a set of modern statistical dimension reduction techniques into the Python universe as a single, consistent package. The dimension reduction methods included resort into three categories: projection…

Computation · Statistics 2020-06-03 Emmanuel Jordy Menvouta , Sven Serneels , Tim Verdonck

QuTiP, the Quantum Toolbox in Python, has been at the forefront of open-source quantum software for the past 13 years. It is used as a research, teaching, and industrial tool, and has been downloaded millions of times by users around the…

In this paper, we present a nonlinear analysis software toolkit, which can help in biomechanical gait data analysis by implementing various nonlinear statistical analysis algorithms. The toolkit is proposed to tackle the need for an…

Emerging Technologies · Computer Science 2023-11-14 Shifat Sarwar , Aaron Likens , Nick Stergiou , Spyridon Mastorakis

In the domain of vehicle telematics the automated recognition of driving maneuvers is used to classify and evaluate driving behaviour. This not only serves as a component to enhance the personalization of insurance policies, but also to…

Machine Learning · Computer Science 2025-07-01 Jonathan Schuster , Fabian Transchel

Markerless motion tracking has advanced rapidly in the past 10 years and currently offers powerful opportunities for behavioural, clinical, and biomechanical research. While several specialised toolkits provide high performance for specific…

Computer Vision and Pattern Recognition · Computer Science 2025-11-20 Hristo Dimitrov , Giulia Dominijanni , Viktorija Pavalkyte , Tamar R. Makin

Scikit-HEP is a community-driven and community-oriented project with the goal of providing an ecosystem for particle physics data analysis in Python. Scikit-HEP is a toolset of approximately twenty packages and a few "affiliated" packages.…

SPARKX is an open-source Python package developed to analyze simulation data from heavy-ion collision experiments. By offering a comprehensive suite of tools, SPARKX simplifies data analysis workflows, supports multiple formats such as…

Data Analysis, Statistics and Probability · Physics 2026-02-02 Nils Sass , Hendrik Roch , Niklas Götz , Renata Krupczak , Carl B. Rosenkvist

We present the $Y_0$ Python package, which implements causal identification algorithms that apply interventional, counterfactual, and transportability queries to data from (randomized) controlled trials, observational studies, or mixtures…

Mayavi is an open-source, general-purpose, 3D scientific visualization package. It seeks to provide easy and interactive tools for data visualization that fit with the scientific user's workflow. For this purpose, Mayavi provides several…

Software Engineering · Computer Science 2011-03-14 Prabhu Ramachandran , Gaël Varoquaux

An understanding of the energy dependence of gamma-ray sources can yield important information on the underlying emission mechanisms. However, despite the detection of energy-dependent morphologies in many TeV sources, we lack a proper…

High Energy Astrophysical Phenomena · Physics 2025-09-03 K. Feijen , R. Terrier , B. Khélifi , A. Sinha , A. Donath , A. Mitchell , Q. Remy

Due to the advent of new mobile devices and tracking sensors in recent years, huge amounts of data are being produced every day. Therefore, novel methodologies need to emerge that dive through this vast sea of information and generate…

Computer Vision and Pattern Recognition · Computer Science 2022-05-31 Ioannis Kontopoulos , Antonios Makris , Konstantinos Tserpes , Vania Bogorny

With the increasing amount of data and use of computation in science, software has become an important component in many different domains. Computing is now being used more often and in more aspects of scientific work including data…

Software Engineering · Computer Science 2013-12-17 David Koop , Juliana Freire , Claudio T. Silva

The Astropy project supports and fosters the development of open-source and openly-developed Python packages that provide commonly-needed functionality to the astronomical community. A key element of the Astropy project is the core package…

Instrumentation and Methods for Astrophysics · Physics 2018-08-29 The Astropy Collaboration , A. M. Price-Whelan , B. M. Sipőcz , H. M. Günther , P. L. Lim , S. M. Crawford , S. Conseil , D. L. Shupe , M. W. Craig , N. Dencheva , A. Ginsburg , J. T. VanderPlas , L. D. Bradley , D. Pérez-Suárez , M. de Val-Borro , T. L. Aldcroft , K. L. Cruz , T. P. Robitaille , E. J. Tollerud , C. Ardelean , T. Babej , M. Bachetti , A. V. Bakanov , S. P. Bamford , G. Barentsen , P. Barmby , A. Baumbach , K. L. Berry , F. Biscani , M. Boquien , K. A. Bostroem , L. G. Bouma , G. B. Brammer , E. M. Bray , H. Breytenbach , H. Buddelmeijer , D. J. Burke , G. Calderone , J. L. Cano Rodríguez , M. Cara , J. V. M. Cardoso , S. Cheedella , Y. Copin , D. Crichton , D. DÁvella , C. Deil , É. Depagne , J. P. Dietrich , A. Donath , M. Droettboom , N. Earl , T. Erben , S. Fabbro , L. A. Ferreira , T. Finethy , R. T. Fox , L. H. Garrison , S. L. J. Gibbons , D. A. Goldstein , R. Gommers , J. P. Greco , P. Greenfield , A. M. Groener , F. Grollier , A. Hagen , P. Hirst , D. Homeier , A. J. Horton , G. Hosseinzadeh , L. Hu , J. S. Hunkeler , Ž. Ivezić , A. Jain , T. Jenness , G. Kanarek , S. Kendrew , N. S. Kern , W. E. Kerzendorf , A. Khvalko , J. King , D. Kirkby , A. M. Kulkarni , A. Kumar , A. Lee , D. Lenz , S. P. Littlefair , Z. Ma , D. M. Macleod , M. Mastropietro , C. McCully , S. Montagnac , B. M. Morris , M. Mueller , S. J. Mumford , D. Muna , N. A. Murphy , S. Nelson , G. H. Nguyen , J. P. Ninan , M. Nöthe , S. Ogaz , S. Oh , J. K. Parejko , N. Parley , S. Pascual , R. Patil , A. A. Patil , A. L. Plunkett , J. X. Prochaska , T. Rastogi , V. Reddy Janga , J. Sabater , P. Sakurikar , M. Seifert , L. E. Sherbert , H. Sherwood-Taylor , A. Y. Shih , J. Sick , M. T. Silbiger , S. Singanamalla , L. P. Singer , P. H. Sladen , K. A. Sooley , S. Sornarajah , O. Streicher , P. Teuben , S. W. Thomas , G. R. Tremblay , J. E. H. Turner , V. Terrón , M. H. van Kerkwijk , A. de la Vega , L. L. Watkins , B. A. Weaver , J. B. Whitmore , J. Woillez , V. Zabalza

Survival analysis, a foundational tool for modeling time-to-event data, has seen growing integration with machine learning (ML) approaches to handle the complexities of censored data and time-varying risks. Despite these advances,…

Quantitative Methods · Quantitative Biology 2025-02-05 Giovanni Birolo , Ivan Rossi , Flavio Sartori , Cesare Rollo , Tiziana Sanavia , Piero Fariselli

Much of the progress made in time-domain astronomy is accomplished by relating observational multi-wavelength time series data to models derived from our understanding of physical laws. This goal is typically accomplished by dividing the…

Instrumentation and Methods for Astrophysics · Physics 2018-05-23 James Guillochon , Matt Nicholl , V. Ashley Villar , Brenna Mockler , Gautham Narayan , Kaisey S. Mandel , Edo Berger , Peter K. G. Williams

Importance sampling of trajectories has proved a uniquely successful strategy for exploring rare dynamical behaviors of complex systems in an unbiased way. Carrying out this sampling, however, requires an ability to propose changes to…

Statistical Mechanics · Physics 2015-07-01 Todd R. Gingrich , Phillip L. Geissler

Microscopy, in particular scanning probe and electron microscopy, has been pivotal in improving our understanding of structure-function relationships at the nanoscale and is by now ubiquitous in most research characterization labs and…

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