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The structure and function of biological molecules are strongly influenced by the water and dissolved ions that surround them. This aqueous solution (solvent) exerts significant electrostatic forces in response to the biomolecule's…

Numerical Analysis · Mathematics 2015-12-29 Matthew G. Knepley , Jaydeep P. Bardhan

We present Bayesian Binary Search (BBS), a novel probabilistic variant of the classical binary search/bisection algorithm. BBS leverages machine learning/statistical techniques to estimate the probability density of the search space and…

Machine Learning · Computer Science 2024-10-03 Vikash Singh , Matthew Khanzadeh , Vincent Davis , Harrison Rush , Emanuele Rossi , Jesse Shrader , Pietro Lio

Eigenvalue analysis is a well-established tool for stability analysis of dynamical systems. However, there are situations where eigenvalues miss some important features of physical models. For example, in models of incompressible fluid…

Numerical Analysis · Mathematics 2017-10-23 Howard C. Elman , David J. Silvester

Semi-supervised learning by self-training heavily relies on pseudo-label selection (PLS). The selection often depends on the initial model fit on labeled data. Early overfitting might thus be propagated to the final model by selecting…

Machine Learning · Statistics 2023-06-27 Julian Rodemann , Jann Goschenhofer , Emilio Dorigatti , Thomas Nagler , Thomas Augustin

There are several examples of spaces of univariate functions for which we have a characterization of all sets of knots which are poised for the interpolation problem. For the standard spaces of univariate polynomials, or spline functions…

Numerical Analysis · Mathematics 2016-10-06 Hayk Avdalyan , Hakop Hakopian

A class of simultaneous equation models arise in the many domains where observed binary outcomes are themselves a consequence of the existing choices of of one of the agents in the model. These models are gaining increasing interest in the…

Econometrics · Economics 2025-12-30 Shakeeb Khan , Elie Tamer , Qingsong Yao

In this paper, decision theory was used to derive Bayes and minimax decision rules to estimate allelic frequencies and to explore their admissibility. Decision rules with uniformly smallest risk usually do not exist and one approach to…

Quantitative Methods · Quantitative Biology 2015-08-25 Carlos Alberto Martínez , Kshitij Khare , Mauricio A. Elzo

Bayesian structure learning allows inferring Bayesian network structure from data while reasoning about the epistemic uncertainty -- a key element towards enabling active causal discovery and designing interventions in real world systems.…

Machine Learning · Computer Science 2021-12-17 Lars Lorch , Jonas Rothfuss , Bernhard Schölkopf , Andreas Krause

In real-world applications, observations are often constrained to a small fraction of a system. Such spatial subsampling can be caused by the inaccessibility or the sheer size of the system, and cannot be overcome by longer sampling.…

Data Analysis, Statistics and Probability · Physics 2017-06-02 Anna Levina , Viola Priesemann

Bayesian neural networks (BNNs) have recently regained a significant amount of attention in the deep learning community due to the development of scalable approximate Bayesian inference techniques. There are several advantages of using a…

Machine Learning · Statistics 2023-05-02 Aliaksandr Hubin , Geir Storvik

Semi-supervised learning has emerged as an appealing strategy to train deep models with limited supervision. Most prior literature under this learning paradigm resorts to dual-based architectures, typically composed of a teacher-student…

Computer Vision and Pattern Recognition · Computer Science 2022-03-08 Martin Van Waerebeke , Gregory Lodygensky , Jose Dolz

The combination of linear and nonlinear potentials, both shaped as a single well, enables competition between the confinement and expulsion induced by the former and latter potentials, respectively. We demonstrate that this setting leads to…

Pattern Formation and Solitons · Physics 2018-10-18 Dmitry A. Zezyulin , Mikhail E. Lebedev , Georgy L. Alfimov , Boris A. Malomed

Bell's theorem admits several interpretations or 'solutions', the standard interpretation being 'indeterminism', a next one 'nonlocality'. In this article two further solutions are investigated, termed here 'superdeterminism' and…

Quantum Physics · Physics 2015-06-04 Louis Vervoort

The issue of algorithmic biases in deep learning has led to the development of various debiasing techniques, many of which perform complex training procedures or dataset manipulation. However, an intriguing question arises: is it possible…

We propose a model of a nonlinear double-well potential (NDWP), alias a double-well pseudopotential, with the objective to study an alternative implementation of the spontaneous symmetry breaking (SSB) in Bose-Einstein condensates (BECs)…

Other Condensed Matter · Physics 2009-11-13 Thawatchai Mayteevarunyoo , Boris A. Malomed , Guangjiong Dong

We introduce Biphoton Entanglement Light Spectroscopy (BELS), a quantum spectroscopic technique that employs polarization entangled Bell pairs and two photon interference to probe material properties. In BELS, the measured signal arises not…

Quantum Physics · Physics 2026-03-25 V. V. Desai , N. P. Armitage

We study the universal properties of eigenstate entanglement entropy across the transition between many-body localized (MBL) and thermal phases. We develop an improved real space renormalization group approach that enables numerical…

Disordered Systems and Neural Networks · Physics 2017-09-18 Philipp T. Dumitrescu , Romain Vasseur , Andrew C. Potter

Multilayer (or multiple) networks are widely used to represent diverse patterns of relationships among objects in increasingly complex real-world systems. Identifying a common invariant subspace across network layers has become an active…

Methodology · Statistics 2026-01-13 Qianqian Yao

In this paper, we consider a Bayesian bi-level variable selection problem in high-dimensional regressions. In many practical situations, it is natural to assign group membership to each predictor. Examples include that genetic variants can…

Applications · Statistics 2018-03-29 Mingxuan Cai , Mingwei Dai , Jingsi Ming , Heng Peng , Jin Liu , Can Yang

We introduce the Graph Sylvester Embedding (GSE), an unsupervised graph representation of local similarity, connectivity, and global structure. GSE uses the solution of the Sylvester equation to capture both network structure and…

Machine Learning · Computer Science 2022-05-10 Shay Deutsch , Stefano Soatto