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We present network embedding algorithms that capture information about a node from the local distribution over node attributes around it, as observed over random walks following an approach similar to Skip-gram. Observations from…

Machine Learning · Computer Science 2021-03-23 Benedek Rozemberczki , Carl Allen , Rik Sarkar

This article presents a new way to understand the descriptive ability of tree shape statistics. Where before tree shape statistics were chosen by their ability to distinguish between macroevolutionary models, the ``resolution'' presented in…

Populations and Evolution · Quantitative Biology 2007-05-23 Frederick A. Matsen

Tabular data learning has extensive applications in deep learning but its existing embedding techniques are limited in numerical and categorical features such as the inability to capture complex relationships and engineering. This paper…

Machine Learning · Computer Science 2024-09-02 Yuqian Wu , Hengyi Luo , Raymond S. T. Lee

The automatic semantic segmentation of the huge amount of acquired remote sensing data has become an important task in the last decade. Images and Point Clouds (PCs) are fundamental data representations, particularly in urban mapping…

Computer Vision and Pattern Recognition · Computer Science 2025-08-05 Dominik Laupheimer , Norbert Haala

A simple framework Probabilistic Multi-view Graph Embedding (PMvGE) is proposed for multi-view feature learning with many-to-many associations so that it generalizes various existing multi-view methods. PMvGE is a probabilistic model for…

Machine Learning · Statistics 2018-06-12 Akifumi Okuno , Tetsuya Hada , Hidetoshi Shimodaira

We propose a novel tree classification system called Treelogy, that fuses deep representations with hand-crafted features obtained from leaf images to perform leaf-based plant classification. Key to this system are segmentation of the leaf…

Computer Vision and Pattern Recognition · Computer Science 2017-01-31 İlke Çuğu , Eren Şener , Çağrı Erciyes , Burak Balcı , Emre Akın , Itır Önal , Ahmet Oğuz Akyüz

Binary trait data record the presence or absence of distinguishing traits in individuals. We treat the problem of estimating ancestral trees with time depth from binary trait data. Simple analysis of such data is problematic. Each homology…

Methodology · Statistics 2009-08-31 Geoff K. Nicholls , Russell D. Gray

A phylogenetic tree shows the evolutionary relationships among species. Internal nodes of the tree represent speciation events and leaf nodes correspond to species. A goal of phylogenetics is to combine such trees into larger trees, called…

Artificial Intelligence · Computer Science 2014-01-16 Neil C. A. Moore , Patrick Prosser

Data integration tasks such as the creation and extension of knowledge graphs involve the fusion of heterogeneous entities from many sources. Matching and fusion of such entities require to also match and combine their properties…

Databases · Computer Science 2020-10-06 Daniel Ayala , Inma Hernández , David Ruiz , Erhard Rahm

We propose a novel methodology, forest floor, to visualize and interpret random forest (RF) models. RF is a popular and useful tool for non-linear multi-variate classification and regression, which yields a good trade-off between robustness…

Machine Learning · Statistics 2016-07-05 Soeren H. Welling , Hanne H. F. Refsgaard , Per B. Brockhoff , Line H. Clemmensen

Collecting fine-grained labels usually requires expert-level domain knowledge and is prohibitive to scale up. In this paper, we propose Attribute Mix, a data augmentation strategy at attribute level to expand the fine-grained samples. The…

Computer Vision and Pattern Recognition · Computer Science 2020-07-10 Hao Li , Xiaopeng Zhang , Hongkai Xiong , Qi Tian

Visualization is a powerful paradigm for exploratory data analysis. Visualizing large graphs, however, often results in a meaningless hairball. In this paper, we propose a different approach that helps the user adaptively explore large…

Information Retrieval · Computer Science 2016-07-25 Robert Pienta , Zhiyuan Lin , Minsuk Kahng , Jilles Vreeken , Partha P. Talukdar , James Abello , Ganesh Parameswaran , Duen Horng Chau

Our goal is to visualize an additional data dimension of a tree with multifaceted data through superimposition on vertical strips, which we call columns. Specifically, we extend upward drawings of unordered rooted trees where vertices have…

Computational Geometry · Computer Science 2023-09-06 Jonathan Klawitter , Johannes Zink

Neural networks and tree ensembles are state-of-the-art learners, each with its unique statistical and computational advantages. We aim to combine these advantages by introducing a new layer for neural networks, composed of an ensemble of…

Machine Learning · Computer Science 2020-07-14 Hussein Hazimeh , Natalia Ponomareva , Petros Mol , Zhenyu Tan , Rahul Mazumder

In this paper, we present a new approach to learning cascaded classifiers for use in computing environments that involve networks of heterogeneous and resource-constrained, low-power embedded compute and sensing nodes. We present a…

Machine Learning · Statistics 2017-06-27 Hamid Dadkhahi , Benjamin M. Marlin

We introduce a new algorithm, called CDER, for supervised machine learning that merges the multi-scale geometric properties of Cover Trees with the information-theoretic properties of entropy. CDER applies to a training set of labeled…

Machine Learning · Computer Science 2018-01-23 Abraham Smith , Paul Bendich , John Harer , Alex Pieloch , Jay Hineman

The investigation of leaf-level traits in response to varying environmental conditions has immense importance for understanding plant ecology. Remote sensing technology enables measurement of the reflectance of plants to make inferences…

Applications · Statistics 2022-10-04 Philip A. White , Michael F. Christensen , Henry Frye , Alan E. Gelfand , John A. Silander

We introduce the concept of derivate-based component-trees for images with an arbitrary number of channels. The approach is a natural extension of the classical component-tree devoted to gray-scale images. The similar structure enables the…

Computer Vision and Pattern Recognition · Computer Science 2018-04-20 Tobias Böttger , Dominik Gutermuth

Multi-class classification problems often have many semantically similar classes. For example, 90 of ImageNet's 1000 classes are for different breeds of dog. We should expect that these semantically similar classes will have similar…

Machine Learning · Computer Science 2022-04-19 Yujie Wang , Mike Izbicki

Tree Containment is a fundamental problem in phylogenetics useful for verifying a proposed phylogenetic network, representing the evolutionary history of certain species. Tree Containment asks whether the given phylogenetic tree (for…

Populations and Evolution · Quantitative Biology 2024-06-14 Arkadiy Dushatskiy , Esther Julien , Leen Stougie , Leo van Iersel