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In this paper, we introduced a novel feature extraction approach, named exclusive autoencoder (XAE), which is a supervised version of autoencoder (AE), able to largely improve the performance of nucleus detection and classification on…

Computer Vision and Pattern Recognition · Computer Science 2018-11-29 Chao-Hui Huang , Daniel Racoceanu

Computer-aided Whole Slide Image (WSI) classification has the potential to enhance the accuracy and efficiency of clinical pathological diagnosis. It is commonly formulated as a Multiple Instance Learning (MIL) problem, where each WSI is…

Computer Vision and Pattern Recognition · Computer Science 2025-04-17 Linhao Qu , Shiman Li , Xiaoyuan Luo , Shaolei Liu , Qinhao Guo , Manning Wang , Zhijian Song

Electroencephalogram (EEG) is the recording which is the result due to the activity of bio-electrical signals that is acquired from electrodes placed on the scalp. In Electroencephalogram signal(EEG) recordings, the signals obtained are…

Electrical Impedance Tomography (EIT) is an emerging non-invasive medical imaging modality. It is based on feeding electrical currents into the patient, measuring the resulting voltages at the skin, and recovering the internal conductivity…

Image and Video Processing · Electrical Eng. & Systems 2020-11-06 Juan Pablo Agnelli , Aynur Çöl , Matti Lassas , Rashmi Murthy , Matteo Santacesaria , Samuli Siltanen

Esophageal varices (EV), a serious health concern resulting from portal hypertension, are traditionally diagnosed through invasive endoscopic procedures. Despite non-contrast computed tomography (NC-CT) imaging being a less expensive and…

Image and Video Processing · Electrical Eng. & Systems 2024-07-19 Chunli Li , Xiaoming Zhang , Yuan Gao , Xiaoli Yin , Le Lu , Ling Zhang , Ke Yan , Yu Shi

Background: Ultrasound imaging plays a pivotal role in diagnosing carotid atherosclerosis, a significant precursor to cardiovascular and cerebrovascular diseases and events. This non-invasive modality provides real-time, high-resolution…

High-throughput omics profiling advancements have greatly enhanced cancer patient stratification. However, incomplete data in multi-omics integration presents a significant challenge, as traditional methods like sample exclusion or…

Genomics · Quantitative Biology 2024-01-17 Shihao Ma , Andy G. X. Zeng , Benjamin Haibe-Kains , Anna Goldenberg , John E Dick , Bo Wang

Nuclei instance segmentation in histopathological images is of great importance for biological analysis and cancer diagnosis but remains challenging for two reasons. (1) Similar visual presentation of intranuclear and extranuclear regions…

Computer Vision and Pattern Recognition · Computer Science 2024-02-12 Ye Zhang , Linghan Cai , Ziyue Wang , Yongbing Zhang

Wireless capsule endoscopy (WCE) enables non-invasive visual assessment of the small bowel, but its clinical utility is constrained by the large volume of frames generated per examination and the difficulty of recognising subtle…

Computer Vision and Pattern Recognition · Computer Science 2026-05-12 Haroon Wahab , Irfan Mehmood , Hassan Ugail

In this work, we leverage machine learning techniques to identify potential biomarkers of oxygen desaturation during sleep exclusively from electroencephalogram (EEG) signals in pediatric patients with sleep apnea. Development of a machine…

Signal Processing · Electrical Eng. & Systems 2025-02-03 Shashank Manjunath , Aarti Sathyanarayana

Multi-organ segmentation holds paramount significance in many clinical tasks. In practice, compared to large fully annotated datasets, multiple small datasets are often more accessible and organs are not labelled consistently. Normally, an…

Computer Vision and Pattern Recognition · Computer Science 2025-03-31 Zhendi Gong , Susan Francis , Eleanor Cox , Stamatios N. Sotiropoulos , Dorothee P. Auer , Guoping Qiu , Andrew P. French , Xin Chen

In this paper, we propose a novel top-down instance segmentation framework based on explicit shape encoding, named \textbf{ESE-Seg}. It largely reduces the computational consumption of the instance segmentation by explicitly decoding the…

Computer Vision and Pattern Recognition · Computer Science 2019-08-13 Wenqiang Xu , Haiyang Wang , Fubo Qi , Cewu Lu

Automatic integration of whole slide images (WSIs) and gene expression profiles has demonstrated substantial potential in precision clinical diagnosis and cancer progression studies. However, most existing studies focus on individual gene…

Computer Vision and Pattern Recognition · Computer Science 2026-01-14 Junzhuo Liu , Xuemei Du , Daniel Reisenbuchler , Ye Chen , Markus Eckstein , Christian Matek , Friedrich Feuerhake , Dorit Merhof

Although current semi-supervised medical segmentation methods can achieve decent performance, they are still affected by the uncertainty in unlabeled data and model predictions, and there is currently a lack of effective strategies that can…

Computer Vision and Pattern Recognition · Computer Science 2024-04-10 Yuanpeng He

In the field of neuroscience, Brain activity analysis is always considered as an important area. Schizophrenia(Sz) is a brain disorder that severely affects the thinking, behaviour, and feelings of people all around the world.…

Signal Processing · Electrical Eng. & Systems 2021-11-23 Geetanjali Sharma , Amit M. Joshi

Within neuroimgaing studies it is a common practice to perform repetitions of trials in an experiment when working with a noisy class of data acquisition system, such as electroencephalography (EEG) or magnetoencephalography (MEG). While…

Signal Processing · Electrical Eng. & Systems 2024-06-26 Jack Kilgallen , Barak Pearlmutter , Jeffery Mark Siskind

Instance segmentation of biological images is essential for studying object behaviors and properties. The challenges, such as clustering, occlusion, and adhesion problems of the objects, make instance segmentation a non-trivial task.…

Computer Vision and Pattern Recognition · Computer Science 2019-11-22 Jingru Yi , Hui Tang , Pengxiang Wu , Bo Liu , Daniel J. Hoeppner , Dimitris N. Metaxas , Lianyi Han , Wei Fan

Osteoporosis is a common skeletal disease that seriously affects patients' quality of life. Traditional osteoporosis diagnosis methods are expensive and complex. The semi-supervised model based on diffusion model and class threshold…

Image and Video Processing · Electrical Eng. & Systems 2024-03-12 Wenchi Ke

Membranous nephropathy (MN) is a frequent type of adult nephrotic syndrome, which has a high clinical incidence and can cause various complications. In the biopsy microscope slide of membranous nephropathy, spikelike projections on the…

Computer Vision and Pattern Recognition · Computer Science 2020-07-21 Yilin Chen , Ming Li , Yongfei Wu , Xueyu Liu , Fang Hao , Daoxiang Zhou , Xiaoshuang Zhou , Chen Wang

Endoscopy is a widely used imaging modality to diagnose and treat diseases in hollow organs as for example the gastrointestinal tract, the kidney and the liver. However, due to varied modalities and use of different imaging protocols at…

Computer Vision and Pattern Recognition · Computer Science 2020-03-30 Sharib Ali , Binod Bhattarai , Tae-Kyun Kim , Jens Rittscher
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