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Causal inference in multivariate time series is challenging due to the fact that the sampling rate may not be as fast as the timescale of the causal interactions. In this context, we can view our observed series as a subsampled version of…

Methodology · Statistics 2017-04-11 Alex Tank , Emily B. Fox , Ali Shojaie

Estimation of origin-destination (OD) demand plays a key role in successful transportation studies. In this paper, we consider the estimation of time-varying day-to-day OD flows given data on traffic volumes in a transportation network for…

To better predict the dynamics of epidemics such as COVID-19, it is important not only to investigate the network of local and long-range contagious contacts but also to understand the temporal dynamics of infectiousness and detectable…

Populations and Evolution · Quantitative Biology 2025-09-03 Miguel A. Cajahuanca Ricaldi , Yaroslav Ispolatov

This paper is concerned with a stochastic model for the spread of an SEIR (susceptible -> exposed (=latent) -> infective -> removed) epidemic with a contact tracing scheme, in which removed individuals may name some of their infectious…

Probability · Mathematics 2015-12-08 Frank G Ball , Edward S Knock , Philip D O'Neill

Identifying the relative importance of the different transmission routes of the SARS-CoV-2 virus is an urgent research priority. To that end, the different transmission routes, and their role in determining the evolution of the Covid-19…

Populations and Evolution · Quantitative Biology 2020-12-08 Swetaprovo Chaudhuri , Saptarshi Basu , Abhishek Saha

Airborne infection risk analysis is usually performed for enclosed spaces where susceptible individuals are exposed to infectious airborne respiratory droplets by inhalation. It is usually based on exponential, dose-response models of which…

Populations and Evolution · Quantitative Biology 2024-08-01 Yannis Drossinos , Nikolaos I. Stilianakis

Virus transmission from person to person is an emergency event facing the global public. Early detection and isolation of potentially susceptible crowds can effectively control the epidemic of its disease. Existing metrics can not correctly…

Databases · Computer Science 2020-04-15 Huajun He , Ruiyuan Li , Rubin Wang , Jie Bao , Yu Zheng , Tianrui Li

Transmission risk of air-borne diseases in public transportation systems is a concern. The paper proposes a modified Wells-Riley model for risk analysis in public transportation systems to capture the passenger flow characteristics,…

Populations and Evolution · Quantitative Biology 2020-08-20 Jiali Zhou , Haris N. Koutsopoulos

Commuting is an important part of daily life. With the gradual recovery from COVID-19 and more people returning to work from the office, the transmission of COVID-19 during commuting becomes a concern. Recent emerging mobility services…

Applications · Statistics 2023-01-09 Baichuan Mo , Peyman Noursalehi , Haris N. Koutsopoulos , Jinhua Zhao

In this paper, we propose studying the disease spread mechanism in the atmosphere as an engineering problem. Aerosol transmission is the most significant mode among the viral transmission mechanisms that do not include physical contact,…

Signal Processing · Electrical Eng. & Systems 2020-05-06 Maryam Khalid , Osama Amin , Sajid Ahmed , Basem Shihada , Mohamed-Slim Alouini

Early estimates of the transmission properties of a newly emerged pathogen are critical to an effective public health response, and are often based on limited outbreak data. Here, we use simulations to investigate a potential source of bias…

Populations and Evolution · Quantitative Biology 2022-11-17 Thomas Harris , Nicholas Geard , Cameron Zachreson

Interval-censored multi-state data arise in many studies of chronic diseases, where the health status of a subject can be characterized by a finite number of disease states and the transition between any two states is only known to occur…

Methodology · Statistics 2022-09-19 Yu Gu , Donglin Zeng , Gerardo Heiss , D. Y. Lin

A local projection model is defined by a set of linear regressions that account for the associations between exogenous variables and an endogenous variable observed at different time points. While it is standard practice to separately…

Methodology · Statistics 2020-07-14 Masahiro Tanaka

A weighted likelihood technique for robust estimation of a multivariate Wrapped Normal distribution for data points scattered on a p-dimensional torus is proposed. The occurrence of outliers in the sample at hand can badly compromise…

Methodology · Statistics 2021-07-01 Giovanni Saraceno , Claudio Agostinelli , Luca Greco

The World Health Organization (WHO) guidelines for monitoring the effectiveness of HIV treatment in resource-limited settings (RLS) are mostly based on clinical and immunological markers (e.g., CD4 cell counts). Recent research indicates…

Methodology · Statistics 2020-10-05 Tao Liu , Joseph W. Hogan , Lisa Wang , Shangxuan Zhang , Rami Kantor

Latent autoregressive models are useful time series models for the analysis of infectious disease data. Evaluation of the likelihood function of latent autoregressive models is intractable and its approximation through simulation-based…

Methodology · Statistics 2020-06-23 Xanthi Pedeli , Cristiano Varin

Airborne diseases, including COVID-19, raise the question of transmission risk in public transportation systems. However, quantitative analysis of the effectiveness of transmission risk mitigation methods in public transportation is…

Social and Information Networks · Computer Science 2022-02-18 Jiali Zhou , Haris N. Koutsopoulos

Target trial emulation (TTE) enables causal questions to be studied with observational data when randomized controlled trials (RCTs) are infeasible. Yet treatment-effect methods often address causal estimation, missingness, and temporal…

Accurate real-time monitoring of disease transmission is crucial for epidemic control, which has conventionally relied on reported cases or hospital admissions. Such metrics are frequently susceptible to delays in reporting, various forms…

Samples of dynamic or time-varying networks and other random object data such as time-varying probability distributions are increasingly encountered in modern data analysis. Common methods for time-varying data such as functional data…

Methodology · Statistics 2024-07-23 Paromita Dubey , Hans-Georg Müller