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In this paper, we explore the question of whether large language models can support cost-efficient information extraction from tables. We introduce schema-driven information extraction, a new task that transforms tabular data into…

Computation and Language · Computer Science 2024-11-22 Fan Bai , Junmo Kang , Gabriel Stanovsky , Dayne Freitag , Mark Dredze , Alan Ritter

Relational databases (RDBs) underpin the majority of global data management systems, where information is structured into multiple interdependent tables. To effectively use the knowledge within RDBs for predictive tasks, recent advances…

Databases · Computer Science 2026-01-21 Xinyi Gao , Jingxi Zhang , Lijian Chen , Tong Chen , Lizhen Cui , Hongzhi Yin

Deep learning techniques hold immense promise for advancing medical image analysis, particularly in tasks like image segmentation, where precise annotation of regions or volumes of interest within medical images is crucial but manually…

Joint extraction of entities and relations is an important task in information extraction. To tackle this problem, we firstly propose a novel tagging scheme that can convert the joint extraction task to a tagging problem. Then, based on our…

Computation and Language · Computer Science 2017-06-19 Suncong Zheng , Feng Wang , Hongyun Bao , Yuexing Hao , Peng Zhou , Bo Xu

In clinical artificial intelligence (AI), graph representation learning, mainly through graph neural networks (GNNs), stands out for its capability to capture intricate relationships within structured clinical datasets. With diverse data --…

Machine Learning · Computer Science 2023-12-13 Ruth Johnson , Michelle M. Li , Ayush Noori , Owen Queen , Marinka Zitnik

The healthcare sector has experienced a rapid accumulation of digital data recently, especially in the form of electronic health records (EHRs). EHRs constitute a precious resource that IS researchers could utilize for clinical applications…

Machine Learning · Computer Science 2024-11-06 Thiti Suttaket , L Vivek Harsha Vardhan , Stanley Kok

Modeling dynamic graphs, such as those found in social networks, recommendation systems, and e-commerce platforms, is crucial for capturing evolving relationships and delivering relevant insights over time. Traditional approaches primarily…

Machine Learning · Computer Science 2025-04-29 Yuxia Wu , Lizi Liao , Yuan Fang

In recent years, there has been an increasing number of frameworks developed for biomedical entity and relation extraction. This research effort aims to address the accelerating growth in biomedical publications and the intricate nature of…

Computation and Language · Computer Science 2024-08-14 Minh Nguyen , Phuong Le

This paper introduces a novel, entity-aware metric, termed as Radiological Report (Text) Evaluation (RaTEScore), to assess the quality of medical reports generated by AI models. RaTEScore emphasizes crucial medical entities such as…

Computation and Language · Computer Science 2024-10-24 Weike Zhao , Chaoyi Wu , Xiaoman Zhang , Ya Zhang , Yanfeng Wang , Weidi Xie

Healthcare data is increasing in size at an unprecedented speed with much attention on big data analysis and Artificial Intelligence application for quality assurance, clinical training, severity triaging, and decision support. Radiology is…

Information Retrieval · Computer Science 2020-07-08 Ningcheng Li , Guy Maresh , Maxwell Cretcher , Khashayar Farsad , Ramsey Al-Hakim , John Kaufman , Judy Gichoya

Accurate and explainable health event predictions are becoming crucial for healthcare providers to develop care plans for patients. The availability of electronic health records (EHR) has enabled machine learning advances in providing these…

Machine Learning · Computer Science 2021-05-18 Chang Lu , Chandan K. Reddy , Prithwish Chakraborty , Samantha Kleinberg , Yue Ning

In this paper, we propose a novel graph-based data augmentation method that can generally be applied to medical waveform data with graph structures. In the process of recording medical waveform data, such as electrocardiogram (ECG) or…

Machine Learning · Computer Science 2025-02-11 Kyung Geun Kim , Byeong Tak Lee

Document-level event extraction aims to recognize event information from a whole piece of article. Existing methods are not effective due to two challenges of this task: a) the target event arguments are scattered across sentences; b) the…

Computation and Language · Computer Science 2021-06-01 Runxin Xu , Tianyu Liu , Lei Li , Baobao Chang

Diagnosing dental diseases from radiographs is time-consuming and challenging due to the subtle nature of diagnostic evidence. Existing methods, which rely on object detection models designed for natural images with more distinct target…

Computer Vision and Pattern Recognition · Computer Science 2026-01-14 Zhi Qin Tan , Xiatian Zhu , Owen Addison , Yunpeng Li

With the increasingly widespread adoption of AI in healthcare, maintaining the accuracy and reliability of AI models in clinical practice has become crucial. In this context, we introduce novel methods for monitoring the performance of…

Artificial Intelligence · Computer Science 2023-11-27 Vasantha Kumar Venugopal , Abhishek Gupta , Rohit Takhar , Vidur Mahajan

This paper addresses emerging system-level challenges in heterogeneous retrieval-augmented generation (RAG) serving, where complex multi-stage workflows and diverse request patterns complicate efficient execution. We present HedraRAG, a…

Databases · Computer Science 2025-07-15 Zhengding Hu , Vibha Murthy , Zaifeng Pan , Wanlu Li , Xiaoyi Fang , Yufei Ding , Yuke Wang

Objective: Modern medicine needs to shift from a wait and react, curative discipline to a preventative, interdisciplinary science aiming at providing personalised, systemic and precise treatment plans to patients. The aim of this work is to…

Machine Learning · Statistics 2020-09-18 Pietro Barbiero , Ramon Viñas Torné , Pietro Lió

In this paper, we propose DEXTER, an end to end system to extract information from tables present in medical health documents, such as electronic health records (EHR) and explanation of benefits (EOB). DEXTER consists of four sub-system…

Computer Vision and Pattern Recognition · Computer Science 2022-07-19 Nandhinee PR , Harinath Krishnamoorthy , Koushik Srivatsan , Anil Goyal , Sudarsun Santhiappan

Biological systems are governed by structured molecular interactions, where pathways, regulatory circuits, and functional gene relationships shape cellular behavior and disease progression. Much of this knowledge is naturally represented as…

Machine Learning · Computer Science 2026-05-26 Yuwei Xue , Sakib Mostafa , James Zou , Joseph Liao , Maximilian Diehn , Ash A. Alizadeh , Lei Xing , Md. Tauhidul Islam

We propose a representation learning framework for medical diagnosis domain. It is based on heterogeneous network-based model of diagnostic data as well as modified metapath2vec algorithm for learning latent node representation. We compare…

Machine Learning · Computer Science 2020-01-24 Karol Antczak