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Related papers: Implementing Immune Repertoire Models Using Weight…

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The adaptive immune system is a dynamical, self-organized multiscale system that protects vertebrates from both pathogens and internal irregularities, such as tumours. For these reason it fascinates physicists, yet the multitude of…

Quantitative Methods · Quantitative Biology 2020-11-20 Grégoire Altan-Bonnet , Thierry Mora , Aleksandra M. Walczak

Specification inference techniques aim at (automatically) inferring a set of assertions that capture the exhibited software behaviour by generating and filtering assertions through dynamic test executions and mutation testing. Although…

Software Engineering · Computer Science 2023-01-31 Aayush Garg , Renzo Degiovanni , Facundo Molina , Mike Papadakis , Nazareno Aguirre , Maxime Cordy , Yves Le Traon

Filtered-X LMS (FxLMS) is commonly used for active noise control (ANC), wherein the soundfield is minimized at a desired location. Given prior knowledge of the spatial region of the noise or control sources, we could improve FxLMS by…

Machine Learning · Computer Science 2026-02-25 Kanad Sarkar , Austin Lu , Manan Mittal , Yongjie Zhuang , Ryan Corey , Andrew Singer

Bayesian neural networks (BNNs) have received an increased interest in the last years. In BNNs, a complete posterior distribution of the unknown weight and bias parameters of the network is produced during the training stage. This…

Machine Learning · Computer Science 2023-04-14 Yunshi Huang , Emilie Chouzenoux , Victor Elvira , Jean-Christophe Pesquet

Neural networks and deep learning are changing the way that artificial intelligence is being done. Efficiently choosing a suitable network architecture and fine-tune its hyper-parameters for a specific dataset is a time-consuming task given…

Machine Learning · Computer Science 2019-05-16 David Laredo , Yulin Qin , Oliver Schütze , Jian-Qiao Sun

Sparse system identification problems often exist in many applications, such as echo interference cancellation, sparse channel estimation, and adaptive beamforming. One of popular adaptive sparse system identification (ASSI) methods is…

Information Theory · Computer Science 2013-11-07 Guan Gui , Shinya Kumagai , Abolfazl Mehbodniya , Fumiyuki Adachi

We presented an efficient algorithm, fast adaptive flat-histogram ensemble (FAFE), to estimate the density of states (DOS) and to enhance sampling in large systems. FAFE calculates the means of an arbitrary extensive variable $U$ in…

Statistical Mechanics · Physics 2008-11-13 Xin Zhou , Yi Jiang

In this paper we show that inverses of well-conditioned, finite-time Gramians and impulse response matrices of large-scale interconnected systems described by sparse state-space models, can be approximated by sparse matrices. The…

Systems and Control · Computer Science 2014-05-13 Aleksandar Haber , Michel Verhaegen

A weighted finite-state machine with n tapes (n-WFSM) defines a rational relation on n strings. It is a generalization of weighted acceptors (one tape) and transducers (two tapes). After recalling some basic definitions about n-ary weighted…

Formal Languages and Automata Theory · Computer Science 2011-05-02 André Kempe

Many models of population dynamics are formulated as deterministic iterated maps although real populations are stochastic. This is justifiable in the limit of large population sizes, as the stochastic fluctuations are negligible then.…

Populations and Evolution · Quantitative Biology 2025-09-16 Snehal M. Shekatkar

Finite-state models are widely used in software engineering, especially in control systems development. Commonly, in control applications such models are developed manually, hence, keeping them up-to-date requires extra effort. To simplify…

Formal Languages and Automata Theory · Computer Science 2020-02-05 Konstantin Chukharev , Daniil Chivilikhin

Motivation: The analysis of antibodies and T-cell receptors (TCRs) concentrations in serum is a fundamental problem in immunoinformatics. Repertoire construction is a preliminary step of analysis of clonal lineages, understanding of immune…

Genomics · Quantitative Biology 2016-04-11 Alexander Shlemov , Sergey Bankevich , Andrey Bzikadze , Yana Safonova

We introduce an adaptive-weighted tree tensor network, for the study of disordered and inhomogeneous quantum many-body systems. This ansatz is assembled on the basis of the random couplings of the physical system with a procedure that…

Disordered Systems and Neural Networks · Physics 2022-06-07 Giovanni Ferrari , Giuseppe Magnifico , Simone Montangero

We introduce a method that generates ground-state ansatzes for quantum many-body systems which are both analytically tractable and accurate over wide parameter regimes. Our approach leverages a custom symbolic language to construct tensor…

Quantum Physics · Physics 2025-12-01 Matt Lourens , Ilya Sinayskiy , Johannes N. Kriel , Francesco Petruccione

The rise of Large Language Models (LLMs) has boosted the use of Few-Shot Learning (FSL) methods in natural language processing, achieving acceptable performance even when working with limited training data. The goal of FSL is to effectively…

Denial of service attacks pose a threat in constant growth. This is mainly due to their tendency to gain in sophistication, ease of implementation, obfuscation and the recent improvements in occultation of fingerprints. On the other hand,…

Cryptography and Security · Computer Science 2024-02-13 Jorge Maestre Vidal , Ana Lucila Sandoval Orozco , Luis Javier García Villalba

Despite the promising performance of state space models (SSMs) in long sequence modeling, limitations still exist. Advanced SSMs like S5 and S6 (Mamba) in addressing non-uniform sampling, their recursive structures impede efficient SSM…

Machine Learning · Computer Science 2024-06-11 Biqing Qi , Junqi Gao , Kaiyan Zhang , Dong Li , Jianxing Liu , Ligang Wu , Bowen Zhou

Restricted Boltzmann Machines (RBM) are bi-layer neural networks used for the unsupervised learning of model distributions from data. The bipartite architecture of RBM naturally defines an elegant sampling procedure, called Alternating…

Disordered Systems and Neural Networks · Physics 2021-10-27 Clément Roussel , Simona Cocco , Rémi Monasson

Adaptive Mesh Refinement (AMR) enhances the Finite Element Method, an important technique for simulating complex problems in engineering, by dynamically refining mesh regions, enabling a favorable trade-off between computational speed and…

Multiagent Systems · Computer Science 2023-10-11 Niklas Freymuth , Philipp Dahlinger , Tobias Würth , Simon Reisch , Luise Kärger , Gerhard Neumann

Transformers are ubiquitous models in the natural language processing (NLP) community and have shown impressive empirical successes in the past few years. However, little is understood about how they reason and the limits of their…

Computation and Language · Computer Science 2024-03-18 Michael Rizvi , Maude Lizaire , Clara Lacroce , Guillaume Rabusseau
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