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We investigate optimal strategies for decoding perceived natural speech from fMRI data acquired from a limited number of participants. Leveraging Lebel et al. (2023)'s dataset of 8 participants, we first demonstrate the effectiveness of…

Neurons and Cognition · Quantitative Biology 2025-05-28 Louis Jalouzot , Alexis Thual , Yair Lakretz , Christophe Pallier , Bertrand Thirion

Deep predictive coding networks are neuroscience-inspired unsupervised learning models that learn to predict future sensory states. We build upon the PredNet implementation by Lotter, Kreiman, and Cox (2016) to investigate if predictive…

Neurons and Cognition · Quantitative Biology 2019-07-02 Marcio Fonseca

Ultrasound images vary widely across scanners, operators, and anatomical targets, which often causes models trained in one setting to generalize poorly to new hospitals and clinical conditions. The Foundation Model Challenge for Ultrasound…

Computer Vision and Pattern Recognition · Computer Science 2026-03-23 Ufaq Khan , L. D. M. S. Sai Teja , Ayuba Shakiru , Mai A. Shaaban , Yutong Xie , Muhammad Bilal , Muhammad Haris Khan

We present a foundation model for brain MRI that can work with different combinations of imaging sequences. The model uses one encoder with learnable modality embeddings, conditional layer normalization, and a masked autoencoding objective…

Computer Vision and Pattern Recognition · Computer Science 2025-11-06 Minh Sao Khue Luu , Bair N. Tuchinov

Objective: Multi-modal functional magnetic resonance imaging (fMRI) can be used to make predictions about individual behavioral and cognitive traits based on brain connectivity networks. Methods: To take advantage of complementary…

Machine Learning · Computer Science 2024-08-27 Gang Qu , Li Xiao , Wenxing Hu , Kun Zhang , Vince D. Calhoun , Yu-Ping Wang

Multi-modal brain functional connectivity (FC) data have shown great potential for providing insights into individual variations in behavioral and cognitive traits. The joint learning of multi-modal imaging data can utilize the intrinsic…

Quantitative Methods · Quantitative Biology 2019-01-18 Li Xiao , Julia M. Stephen , Tony W. Wilson , Vince D. Calhoun , Yu-Ping Wang

In this paper, we explore a novel federated multimodal instruction tuning task(FedMIT), which is significant for collaboratively fine-tuning MLLMs on different types of multimodal instruction data on distributed devices. To solve the new…

Machine Learning · Computer Science 2025-01-27 Baochen Xiong , Xiaoshan Yang , Yaguang Song , Yaowei Wang , Changsheng Xu

Semantic segmentation is one of the core tasks in the field of computer vision, and its goal is to accurately classify each pixel in an image. The traditional Unet model achieves efficient feature extraction and fusion through an…

Computer Vision and Pattern Recognition · Computer Science 2025-02-07 Xuan Li , Quanchao Lu , Yankaiqi Li , Muqing Li , Yijiashun Qi

In this study we focus on the problem of joint learning of multiple differential networks with function Magnetic Resonance Imaging (fMRI) data sets from multiple research centers. As the research centers may use different scanners and…

Methodology · Statistics 2021-06-08 Hao Chen , Ying Guo , Yong He , Dong Liu , Lei Liu , Xiao-Hua Zhou

Side information of items, e.g., images and text description, has shown to be effective in contributing to accurate recommendations. Inspired by the recent success of pre-training models on natural language and images, we propose a…

Information Retrieval · Computer Science 2021-01-08 Yong Liu , Susen Yang , Chenyi Lei , Guoxin Wang , Haihong Tang , Juyong Zhang , Aixin Sun , Chunyan Miao

This work presents a novel module, namely multi-branch concat (MBC), to process the input tensor and obtain the multi-scale feature map. The proposed MBC module brings new degrees of freedom (DoF) for the design of attention networks by…

Computer Vision and Pattern Recognition · Computer Science 2024-07-09 Keke Zu , Hu Zhang , Jian Lu , Lei Zhang , Chen Xu

Recent advances in the masked autoencoder (MAE) paradigm have significantly propelled self-supervised skeleton-based action recognition. However, most existing approaches limit reconstruction targets to raw joint coordinates or their simple…

Computer Vision and Pattern Recognition · Computer Science 2025-09-05 Shengkai Sun , Zefan Zhang , Jianfeng Dong , Zhiyong Cheng , Xiaojun Chang , Meng Wang

The exploration of brain activity and its decoding from fMRI data has been a longstanding pursuit, driven by its potential applications in brain-computer interfaces, medical diagnostics, and virtual reality. Previous approaches have…

Computer Vision and Pattern Recognition · Computer Science 2023-11-02 Xuelin Qian , Yun Wang , Jingyang Huo , Jianfeng Feng , Yanwei Fu

Multi-omic data provides multiple views of the same patients. Integrative analysis of multi-omic data is crucial to elucidate the molecular underpinning of disease etiology. However, multi-omic data has the "big p, small N" problem (the…

Machine Learning · Computer Science 2018-09-07 Tianle Ma , Aidong Zhang

We developed a deep ensemble learning model with a radiomics spatial encoding execution for improved glioma segmentation accuracy using multi-parametric MRI (mp-MRI). This model was developed using 369 glioma patients with a 4-modality…

Quantitative Methods · Quantitative Biology 2023-03-21 Yang Chen , Zhenyu Yang , Jingtong Zhao , Justus Adamson , Yang Sheng , Fang-Fang Yin , Chunhao Wang

We propose a novel two-phase approach to functional network estimation of multi-subject functional Magnetic Resonance Imaging (fMRI) data, which applies model-based image segmentation to determine a group-representative connectivity map. In…

Computation · Statistics 2018-09-05 Aditi Iyer , Bingjing Tang , Vinayak Rao , Nan Kong

We propose an end-to-end Multitask Learning Transformer framework, named MulT, to simultaneously learn multiple high-level vision tasks, including depth estimation, semantic segmentation, reshading, surface normal estimation, 2D keypoint…

Computer Vision and Pattern Recognition · Computer Science 2022-05-18 Deblina Bhattacharjee , Tong Zhang , Sabine Süsstrunk , Mathieu Salzmann

To effectively exploit the potential of large-scale models, various pre-training strategies supported by massive data from different sources are proposed, including supervised pre-training, weakly-supervised pre-training, and…

Computer Vision and Pattern Recognition · Computer Science 2022-11-22 Weijie Su , Xizhou Zhu , Chenxin Tao , Lewei Lu , Bin Li , Gao Huang , Yu Qiao , Xiaogang Wang , Jie Zhou , Jifeng Dai

We propose UniT, a Unified Transformer model to simultaneously learn the most prominent tasks across different domains, ranging from object detection to natural language understanding and multimodal reasoning. Based on the transformer…

Computer Vision and Pattern Recognition · Computer Science 2021-08-19 Ronghang Hu , Amanpreet Singh

In recent years, analyzing task-based fMRI (tfMRI) data has become an essential tool for understanding brain function and networks. However, due to the sheer size of tfMRI data, its intrinsic complex structure, and lack of ground truth of…

Distributed, Parallel, and Cluster Computing · Computer Science 2018-03-06 Milad Makkie , Heng Huang , Yu Zhao , Athanasios V. Vasilakos , Tianming Liu