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This work proposes stochastic partial differential equations (SPDEs) as a practical tool to replicate clustering effects of more detailed particle-based dynamics. Inspired by membrane-mediated receptor dynamics on cell surfaces, we…

Quantitative Methods · Quantitative Biology 2025-01-22 Nathalie Wehlitz , Mohsen Sadeghi , Alberto Montefusco , Christof Schütte , Grigorios A. Pavliotis , Stefanie Winkelmann

Dirichlet processes and their extensions have reached a great popularity in Bayesian nonparametric statistics. They have also been introduced for spatial and spatio-temporal data, as a tool to analyze and predict surfaces. A popular…

Statistics Theory · Mathematics 2023-03-31 Clara Grazian

Stochastic gradient descent (SGD) is a widely adopted iterative method for optimizing differentiable objective functions. In this paper, we propose and discuss a novel approach to scale up SGD in applications involving non-convex functions…

Machine Learning · Statistics 2022-10-07 Saad Mohamad , Hamad Alamri , Abdelhamid Bouchachia

For data assumed to come from a finite mixture with an unknown number of components, it has become common to use Dirichlet process mixtures (DPMs) not only for density estimation, but also for inferences about the number of components. The…

Statistics Theory · Mathematics 2013-01-15 Jeffrey W. Miller , Matthew T. Harrison

Alignment of curve data is an integral part of their statistical analysis, and can be achieved using model- or optimization-based approaches. The parameter space is usually the set of monotone, continuous warp maps of a domain.…

Statistics Theory · Mathematics 2019-02-05 Karthik Bharath , Sebastian Kurtek

This paper is devoted to a fractional generalization of the Dirichlet distribution. The form of the multivariate distribution is derived assuming that the $n$ partitions of the interval $[0,W_n]$ are independent and identically distributed…

Probability · Mathematics 2021-02-17 Elvira Di Nardo , Federico Polito , Enrico Scalas

The fundamental aim of clustering algorithms is to partition data points. We consider tasks where the discovered partition is allowed to vary with some covariate such as space or time. One approach would be to use fragmentation-coagulation…

Machine Learning · Statistics 2013-11-01 Konstantina Palla , David A. Knowles , Zoubin Ghahramani

For organizing large text corpora topic modeling provides useful tools. A widely used method is Latent Dirichlet Allocation (LDA), a generative probabilistic model which models single texts in a collection of texts as mixtures of latent…

Computation and Language · Computer Science 2020-04-02 Jonas Rieger , Lars Koppers , Carsten Jentsch , Jörg Rahnenführer

When some 'entities' are related by the 'features' they share they are amenable to a bipartite network representation. Plant-pollinator ecological communities, co-authorship of scientific papers, customers and purchases, or answers in a…

Social and Information Networks · Computer Science 2020-10-14 Ignacio Tamarit , María Pereda , José A. Cuesta

Distributed machine learning has been widely studied in the literature to scale up machine learning model training in the presence of an ever-increasing amount of data. We study distributed machine learning from another perspective, where…

Distributed, Parallel, and Cluster Computing · Computer Science 2019-05-16 Yaochen Hu , Di Niu , Jianming Yang , Shengping Zhou

Clustering is one of the most widely used procedures in the analysis of microarray data, for example with the goal of discovering cancer subtypes based on observed heterogeneity of genetic marks between different tissues. It is well-known…

Methodology · Statistics 2009-04-21 Heng Lian

We propose a simple, projection-based algorithm for clustering mixtures of discrete (Bernoulli) distributions. Unlike previous approaches that rely on coordinate-specific ``combinatorial projections,'' our algorithm is rotationally…

Data Structures and Algorithms · Computer Science 2026-04-28 Pradipta Mitra

Although exchangeable processes from Bayesian nonparametrics have been used as a generating mechanism for random partition models, we deviate from this paradigm to explicitly incorporate clustering information in the formulation of our…

Methodology · Statistics 2024-10-28 David B. Dahl , Richard L. Warr , Thomas P. Jensen

Many cluster management systems (CMSs) have been proposed to share a single cluster with multiple distributed computing systems. However, none of the existing approaches can handle distributed machine learning (ML) workloads given the…

Distributed, Parallel, and Cluster Computing · Computer Science 2017-06-19 Peng Sun , Yonggang Wen , Ta Nguyen Binh Duong , Shengen Yan

There is a rich literature on clustering functional data with applications to time-series modeling, trajectory data, and even spatio-temporal applications. However, existing methods routinely perform global clustering that enforces…

Methodology · Statistics 2024-12-16 Tsung-Hung Yao , Suprateek Kundu

Stochastic gradient descent (SGD) provides a simple and efficient way to solve a broad range of machine learning problems. Here, we focus on distribution regression (DR), involving two stages of sampling: Firstly, we regress from…

Machine Learning · Statistics 2021-03-08 Nicole Mücke

Diffusions and related random walk procedures are of central importance in many areas of machine learning, data analysis, and applied mathematics. Because they spread mass agnostically at each step in an iterative manner, they can sometimes…

Data Structures and Algorithms · Computer Science 2018-06-12 Di Wang , Kimon Fountoulakis , Monika Henzinger , Michael W. Mahoney , Satish Rao

Incremental data mining algorithms process frequent updates to dynamic datasets efficiently by avoiding redundant computation. Existing incremental extension to shared nearest neighbor density based clustering (SNND) algorithm cannot handle…

Databases · Computer Science 2017-02-02 Panthadeep Bhattacharjee , Amit Awekar

To understand biological diversification, it is important to account for large-scale processes that affect the evolutionary history of groups of co-distributed populations of organisms. Such events predict temporally clustered divergences…

Populations and Evolution · Quantitative Biology 2014-08-11 Jamie R. Oaks

Distribution learning finds probability density functions from a set of data samples, whereas clustering aims to group similar data points to form clusters. Although there are deep clustering methods that employ distribution learning…

Machine Learning · Computer Science 2024-08-08 Guanfang Dong , Zijie Tan , Chenqiu Zhao , Anup Basu