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The characterization of the "most connected" nodes in static or slowly evolving complex networks has helped in understanding and predicting the behavior of social, biological, and technological networked systems, including their robustness…

Physics and Society · Physics 2010-10-21 Scott A. Hill , Dan Braha

Many biological systems consist of self-motile and passive agents both of which contribute to overall functionality. However, there are very few studies of the properties of such mixtures. Here we formulate a model for mixtures of…

Soft Condensed Matter · Physics 2015-05-25 Denis F. Hinz , Alexander Panchenko , Tae-Yeon Kim , Eliot Fried

We give a constructive method for realizing an arbitrary directed graph (with no one-cycles) as a heteroclinic or an excitable dynamic network in the phase space of a system of coupled cells of two types. In each case, the system is…

Adaptation and Self-Organizing Systems · Physics 2015-12-17 Peter Ashwin , Claire Postlethwaite

We study two-dimensional triangular-network models, which have degenerate ground states composed of straight or randomly-zigzagging stripes and thus sub-extensive residual entropy. We show that attraction is responsible for the inversion of…

Soft Condensed Matter · Physics 2018-02-26 Fabio Leoni , Yair Shokef

It is well known that periodic potentials can be used to induce freezing and melting in colloids. Here, we transfer this concept to active systems and find the emergence of a so-far unknown active matter phase in between the frozen…

Soft Condensed Matter · Physics 2026-01-05 Aritra K. Mukhopadhyay , Peter Schmelcher , Benno Liebchen

In colloidal suspensions, the competition between attractive and repulsive interactions gives rise to a rich and complex phenomenology. Here, we study the equilibrium phase diagram of a model system using a DLVO interaction potential by…

Soft Condensed Matter · Physics 2009-11-11 A. de Candia , E. Del Gado , A. Fierro , N. Sator , M. Tarzia , A. Coniglio

We study the role of hydrodynamic interactions in the collective behaviour of collections of microscopic active particles suspended in a fluid. We introduce a novel calculational framework that allows us to separate the different…

Soft Condensed Matter · Physics 2017-09-06 Natsuhiko Yoshinaga , Tanniemola B. Liverpool

Dynamical systems can be analyzed as computational devices capable of performing information processing. In coupled oscillators, enlarged capabilities are expected when the set of units is formed by subsets with collective behaviour within…

Adaptation and Self-Organizing Systems · Physics 2025-06-24 Ernesto Estevez-Rams , K. Garcia-Medina , B. Aragon-Fernandez

Here we numerically study a model of excitable media, namely, a network with occasionally quiet nodes and connection weights that vary with activity on a short-time scale. Even in the absence of stimuli, this exhibits unstable dynamics,…

Disordered Systems and Neural Networks · Physics 2015-05-19 S. de Franciscis , J. J. Torres , J. Marro

Using confocal microscopy we investigate the effect of attraction on the packing of polydisperse emulsions under gravity. We find that the distributions of neighbors, coordination number, and local packing fraction as a function of…

Soft Condensed Matter · Physics 2011-04-08 Ivane Jorjadze , Lea-Laetitia Pontani , Katherine Newhall , Jasna Brujic

The distribution of entanglement between the nodes of a quantum network plays a fundamental role in quantum information applications. In this work, we investigate the dynamics of a network of qubits where each edge corresponds to an…

We study a microscopically realistic model of a physical gel and use computer simulations to investigate its static and dynamic properties at thermal equilibrium. The phase diagram comprises a sol phase, a coexistence region ending at a…

Soft Condensed Matter · Physics 2009-11-13 Pablo I. Hurtado , Pinaki Chaudhuri , Ludovic Berthier , Walter Kob

The addition of enough non-adsorbing polymer to an otherwise stable colloidal suspension gives rise to a variety of phase behavior and kinetic arrest due to the depletion attraction induced between the colloids by the polymers. We report a…

Soft Condensed Matter · Physics 2024-06-19 Sam E Griffiths , Nick Koumakis , Aidan T Brown , Teun Vissers , Patrick B Warren , Wilson C K Poon

We study percolation and the random cluster model on the triangular lattice with 3-body interactions. Starting with percolation, we generalize the star--triangle transformation: We introduce a new parameter (the 3-body term) and identify…

Statistical Mechanics · Physics 2009-11-11 L. Chayes , H. K. Lei

Collective motion of cells is common in many physiological processes, including tissue development, repair, and tumor formation. Recent experiments have shown that certain malignant cancer cells form clusters in a chemoattractant gradient,…

Biological Physics · Physics 2017-05-02 Katherine Copenhagen , Gema Malet-Engra , Weimiao Yu , Giorgio Scita , Nir Gov , Ajay Gopinathan

Phase separating systems that are maintained away from thermodynamic equilibrium via molecular processes represent a class of active systems, which we call active emulsions. These systems are driven by external energy input for example…

Soft Condensed Matter · Physics 2019-06-07 Christoph A. Weber , David Zwicker , Frank Jülicher , Chiu Fan Lee

In this paper, we propose a novel framework for dynamical analysis of human actions from 3D motion capture data using topological data analysis. We model human actions using the topological features of the attractor of the dynamical system.…

Computational Geometry · Computer Science 2016-03-18 Vinay Venkataraman , Karthikeyan Natesan Ramamurthy , Pavan Turaga

We study a generic model of self-assembling chains which can branch and form networks with branching points (junctions) of arbitrary functionality. The physical realizations include physical gels, wormlike micells, dipolar fluids and…

Soft Condensed Matter · Physics 2009-11-07 A. G. Zilman , S. A. Safran

We obtain the phase diagram for a harmonically trapped dilute dipolar condensate with a short ranged conservative three-body interaction. We show that this system supports two distinct fluid states: a usual condensate state and a…

Quantum Gases · Physics 2016-03-30 P. B. Blakie

Time-discrete dynamical systems on a finite state space have been used with great success to model natural and engineered systems such as biological networks, social networks, and engineered control systems. They have the advantage of being…

Combinatorics · Mathematics 2015-03-17 Alan Veliz-Cuba , Reinhard Laubenbacher