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Meta-analyses statistically aggregate the findings of different randomized controlled trials (RCTs) to assess treatment effectiveness. Because this yields robust estimates of treatment effectiveness, results from meta-analyses are…

Computation and Language · Computer Science 2024-07-26 Hye Sun Yun , David Pogrebitskiy , Iain J. Marshall , Byron C. Wallace

Objective: Fluoropyrimidines are widely prescribed for colorectal and breast cancers, but are associated with toxicities such as hand-foot syndrome and cardiotoxicity. Since toxicity documentation is often embedded in clinical notes, we…

Computation and Language · Computer Science 2025-10-24 Xizhi Wu , Madeline S. Kreider , Philip E. Empey , Chenyu Li , Yanshan Wang

Objective: Few-shot learning (FSL) methods require small numbers of labeled instances for training. As many medical topics have limited annotated textual data in practical settings, FSL-based natural language processing (NLP) methods hold…

Computation and Language · Computer Science 2022-05-02 Yao Ge , Yuting Guo , Yuan-Chi Yang , Mohammed Ali Al-Garadi , Abeed Sarker

Objective: The generalizability of clinical large language models is usually ignored during the model development process. This study evaluated the generalizability of BERT-based clinical NLP models across different clinical settings…

Computation and Language · Computer Science 2023-03-16 Sicheng Zhou , Nan Wang , Liwei Wang , Ju Sun , Anne Blaes , Hongfang Liu , Rui Zhang

The advancements in deep learning, particularly the introduction of transformers, have been pivotal in enhancing various natural language processing (NLP) tasks. These include text-to-text applications such as machine translation, text…

Artificial Intelligence · Computer Science 2024-12-24 Gospel Ozioma Nnadi , Flavio Bertini

General-purpose clinical natural language processing (NLP) tools are increasingly used for the automatic labeling of clinical reports. However, independent evaluations for specific tasks, such as pediatric chest radiograph (CXR) report…

Computation and Language · Computer Science 2025-05-30 Shruti Hegde , Mabon Manoj Ninan , Jonathan R. Dillman , Shireen Hayatghaibi , Lynn Babcock , Elanchezhian Somasundaram

Despite the growing adoption of large language models (LLMs) in academic workflows, their capabilities remain limited in supporting high-quality scientific writing. Most existing systems are designed for general-purpose scientific text…

Computation and Language · Computer Science 2026-04-24 Nuo Chen , Andre Lin HuiKai , Jiaying Wu , Junyi Hou , Zining Zhang , Qian Wang , Xidong Wang , Bingsheng He

The scientific literature is growing rapidly, making it hard to keep track of the state-of-the-art. Systematic literature reviews (SLRs) aim to identify and evaluate all relevant papers on a topic. After retrieving a set of candidate…

Computation and Language · Computer Science 2025-06-09 Christian Jaumann , Andreas Wiedholz , Annemarie Friedrich

Spurred by advancements in scale, large language models (LLMs) have demonstrated the ability to perform a variety of natural language processing (NLP) tasks zero-shot -- i.e., without adaptation on downstream data. Recently, the debut of…

Computation and Language · Computer Science 2023-11-21 Chengwei Qin , Aston Zhang , Zhuosheng Zhang , Jiaao Chen , Michihiro Yasunaga , Diyi Yang

The Abstraction and Reasoning Corpus (ARC-AGI) has become a key benchmark for fluid intelligence in AI. This survey presents the first cross-generation analysis of 82 approaches across three benchmark versions and the ARC Prize 2024-2025…

Artificial Intelligence · Computer Science 2026-03-17 Sahar Vahdati , Andrei Aioanei , Haridhra Suresh , Jens Lehmann

The prediction of learning curves for Natural Language Processing (NLP) models enables informed decision-making to meet specific performance objectives, while reducing computational overhead and lowering the costs associated with dataset…

Machine Learning · Computer Science 2025-10-21 Viktoria Schram , Markus Hiller , Daniel Beck , Trevor Cohn

A systematic review identifies and collates various clinical studies and compares data elements and results in order to provide an evidence based answer for a particular clinical question. The process is manual and involves lot of time. A…

Information Retrieval · Computer Science 2016-06-22 Tanmay Basu , Shraman Kumar , Abhishek Kalyan , Priyanka Jayaswal , Pawan Goyal , Stephen Pettifer , Siddhartha R. Jonnalagadda

Purpose: The purpose of this study was to determine if an ensemble of multiple LLM agents could be used collectively to provide a more reliable assessment of a pixel-based AI triage tool than a single LLM. Methods: 29,766 non-contrast CT…

Computation and Language · Computer Science 2025-10-31 Adam E. Flanders , Yifan Peng , Luciano Prevedello , Robyn Ball , Errol Colak , Prahlad Menon , George Shih , Hui-Ming Lin , Paras Lakhani

Extracting structured medical insights from unstructured clinical text using Natural Language Processing (NLP) remains an open challenge in healthcare, particularly in non-English contexts where resources are scarce. This study presents a…

Artificial Intelligence · Computer Science 2025-11-21 Paulina Tworek , Miłosz Bargieł , Yousef Khan , Tomasz Pełech-Pilichowski , Marek Mikołajczyk , Roman Lewandowski , Jose Sousa

Objective: Narrative text in Electronic health records (EHR) contain rich information for medical and data science studies. This paper introduces the design and performance of Narrative Information Linear Extraction (NILE), a natural…

Computation and Language · Computer Science 2019-07-17 Sheng Yu , Tianrun Cai , Tianxi Cai

Large Language Models (LLMs) are capable of answering questions in natural language for various purposes. With recent advancements (such as GPT-4), LLMs perform at a level comparable to humans for many proficient tasks. The analysis of…

Databases · Computer Science 2023-07-17 Alessandro Berti , Daniel Schuster , Wil M. P. van der Aalst

Post-stroke patient rehabilitation requires precise, personalized treatment plans. Natural Language Processing (NLP) offers potential to extract valuable exercise information from clinical notes, aiding in the development of more effective…

Computation and Language · Computer Science 2024-03-18 Sonish Sivarajkumar , Fengyi Gao , Parker E. Denny , Bayan M. Aldhahwani , Shyam Visweswaran , Allyn Bove , Yanshan Wang

Vision-language foundation models (VLMs) show promise for diverse imaging tasks but often underperform on medical benchmarks. Prior efforts to improve performance include model finetuning, which requires large domain-specific datasets and…

Computer Vision and Pattern Recognition · Computer Science 2025-11-18 Arnav Singhvi , Vasiliki Bikia , Asad Aali , Akshay Chaudhari , Roxana Daneshjou

Large language models (LLMs) exhibited powerful capability in various natural language processing tasks. This work focuses on exploring LLM performance on zero-shot information extraction, with a focus on the ChatGPT and named entity…

Computation and Language · Computer Science 2023-10-17 Tingyu Xie , Qi Li , Jian Zhang , Yan Zhang , Zuozhu Liu , Hongwei Wang

PURPOSE: Incident reports are an important tool for safety and quality improvement in healthcare, but manual review is time-consuming and requires subject matter expertise. Here we present a natural language processing (NLP) screening tool…

Computation and Language · Computer Science 2025-09-18 Peter Beidler , Mark Nguyen , Kevin Lybarger , Ola Holmberg , Eric Ford , John Kang
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