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This review examines the development of abstractive NLP-based text summarization approaches and compares them to existing techniques for extractive summarization. A brief history of text summarization from the 1950s to the introduction of…

Computation and Language · Computer Science 2024-11-19 Leon Kopitar , Primoz Kocbek , Lucija Gosak , Gregor Stiglic

As a new programming paradigm, deep neural networks (DNNs) have been increasingly deployed in practice, but the lack of robustness hinders their applications in safety-critical domains. While there are techniques for verifying DNNs with…

Software Engineering · Computer Science 2022-07-05 Jiaxiang Liu , Yunhan Xing , Xiaomu Shi , Fu Song , Zhiwu Xu , Zhong Ming

In this paper, we present our approach to extracting structured information from unstructured Electronic Health Records (EHR) [2] which can be used to, for example, study adverse drug reactions in patients due to chemicals in their…

Computation and Language · Computer Science 2020-01-30 Amogh Kamat Tarcar , Aashis Tiwari , Vineet Naique Dhaimodker , Penjo Rebelo , Rahul Desai , Dattaraj Rao

Abstraction is a core tenet of human cognition and communication. When composing natural language instructions, humans naturally evoke abstraction to convey complex procedures in an efficient and concise way. Yet, interpreting and grounding…

Computation and Language · Computer Science 2022-10-03 Royi Lachmy , Valentina Pyatkin , Avshalom Manevich , Reut Tsarfaty

We present a methodology for formulating simplifying abstractions in machine learning systems by identifying and harnessing the utility structure of decisions. Machine learning tasks commonly involve high-dimensional output spaces (e.g.,…

Machine Learning · Computer Science 2023-03-31 Michael Poli , Stefano Massaroli , Stefano Ermon , Bryan Wilder , Eric Horvitz

Objective: This review aims to analyze the application of natural language processing (NLP) techniques in cancer research using electronic health records (EHRs) and clinical notes. This review addresses gaps in the existing literature by…

Computation and Language · Computer Science 2025-02-05 Muhammad Bilal , Ameer Hamza , Nadia Malik

OpenAI's o3-preview reasoning model exceeded human accuracy on the ARC-AGI-1 benchmark, but does that mean state-of-the-art models recognize and reason with the abstractions the benchmark was designed to test? Here we investigate…

Artificial Intelligence · Computer Science 2026-02-04 Claas Beger , Ryan Yi , Shuhao Fu , Kaleda Denton , Arseny Moskvichev , Sarah W. Tsai , Sivasankaran Rajamanickam , Melanie Mitchell

Background: Formulation, associated with suicide risk assessment, is an individualised process that seeks to understand the idiosyncratic nature and development of an individual's problems. Auditing clinical documentation on an electronic…

Computation and Language · Computer Science 2024-12-23 Rajib Rana , Niall Higgins , Kazi N. Haque , John Reilly , Kylie Burke , Kathryn Turner , Anthony R. Pisani , Terry Stedman

Objective: To develop software utilizing optical character recognition toward the automatic extraction of data from bar charts for meta-analysis. Methods: We utilized a multistep data extraction approach that included figure extraction,…

Information Retrieval · Computer Science 2020-11-10 Alex Carderas , Ye Yuan , Itamar Livnat , Ryan Yanagihara , Rosita Saul , Gabrielle Montes De Oca , Kai Zheng , Andrew W. Browne

Objective: The majority of detailed patient information in real-world data (RWD) is only consistently available in free-text clinical documents. Manual curation is expensive and time-consuming. Developing natural language processing (NLP)…

Large language models (LLMs) have shown the ability to produce fluent and cogent content, presenting both productivity opportunities and societal risks. To build trustworthy AI systems, it is imperative to distinguish between…

Computation and Language · Computer Science 2024-12-17 Guangsheng Bao , Yanbin Zhao , Zhiyang Teng , Linyi Yang , Yue Zhang

Despite the observable benefit of Natural Language Processing (NLP) in processing a large amount of textual medical data within a limited time for information retrieval, a handful of research efforts have been devoted to uncovering novel…

Computation and Language · Computer Science 2024-06-04 Md Taimur Ahad

The digitalization of stored information in hospitals now allows for the exploitation of medical data in text format, as electronic health records (EHRs), initially gathered for other purposes than epidemiology. Manual search and analysis…

Research projects, including those focused on cancer, rely on the manual extraction of information from clinical reports. This process is time-consuming and prone to errors, limiting the efficiency of data-driven approaches in healthcare.…

Computation and Language · Computer Science 2025-05-16 J. Moreno-Casanova , J. M. Auñón , A. Mártinez-Pérez , M. E. Pérez-Martínez , M. E. Gas-López

This paper describes an initial dataset and automatic natural language processing (NLP) method for extracting concepts related to precision oncology from biomedical research articles. We extract five concept types: Cancer, Mutation,…

Artificial Intelligence · Computer Science 2020-10-02 Nicholas Greenspan , Yuqi Si , Kirk Roberts

Introduction: The labour-intensive nature of data extraction from sources like discharge summaries (DS) poses significant obstacles to the digitisation of medical records particularly for low- and middle-income countries (LMICs). In this…

Artificial Intelligence · Computer Science 2024-09-09 Roomani Srivastava , Suraj Prasad , Lipika Bhat , Sarvesh Deshpande , Barnali Das , Kshitij Jadhav

Abstraction of operation processes is a fundamental step for simulation modeling. To reliably abstract an operation process, modelers rely on text information to study and understand details of operations. Aiming at reducing modelers'…

Information Retrieval · Computer Science 2020-07-07 Yitong Li , Wenying Ji , Simaan M. AbouRizk

The growing demand for cognitive remediation therapy, combined with limited speech therapist availability, has accelerated the adoption of remote rehabilitation tools. These systems generate large volumes of interaction data that are…

Computation and Language · Computer Science 2026-05-08 Yongxin Zhou , Fabien Ringeval , François Portet

The superior performance of supervised classification methods in the information extraction (IE) area heavily relies on a large amount of gold standard data. Recent zero-shot classification methods converted the task to other NLP tasks…

Computation and Language · Computer Science 2024-03-07 Jianwei Wang , Tianyin Wang , Ziqian Zeng

Formal method-based analysis of the 5G Wireless Communication Protocol is crucial for identifying logical vulnerabilities and facilitating an all-encompassing security assessment, especially in the design phase. Natural Language Processing…

Computation and Language · Computer Science 2023-08-08 Shiyu Yuan , Jingda Yang , Sudhanshu Arya , Carlo Lipizzi , Ying Wang