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In this work it is shown how the immersed boundary method of (Peskin2002) for modeling flexible structures immersed in a fluid can be extended to include thermal fluctuations. A stochastic numerical method is proposed which deals with…

Soft Condensed Matter · Physics 2023-02-28 P. J. Atzberger , P. R. Kramer , C. S. Peskin

Modeling dispersed solid phases in fluids still represents a computational challenge when considering a small-scale coupling in wide systems, such as the atmosphere or industrial processes at high Reynolds numbers. A numerical method is…

Fluid Dynamics · Physics 2015-08-13 François Laenen , Giorgio Krstulovic , Jérémie Bec

A recently proposed method for computer simulations in the isothermal-isobaric (NPT) ensemble, based on Langevin-type equations of motion for the particle coordinates and the ``piston'' degree of freedom, is re-derived by straightforward…

Soft Condensed Matter · Physics 2016-08-31 A. Kolb , B. Duenweg

This paper describes a node relocation algorithm based on nonlinear optimization which delivers excellent results for both unstructured and structured plane triangle meshes over convex as well as non-convex domains with high curvature. The…

Numerical Analysis · Computer Science 2014-10-23 Daniel Aubram

In this paper, we propose a time-fractional molecular beam epitaxy (MBE) model with slope selection and its efficient, accurate, full discrete, linear numerical approximation. The numerical scheme utilizes the fast algorithm for the Caputo…

Numerical Analysis · Mathematics 2020-01-08 Lizhen Chen , Jia Zhao , Waixiang Cao , Hong Wang , Jiwei Zhang

Although the isogeometric analysis has shown its great potential in achieving highly accurate numerical solutions of partial differential equations, its efficiency is the main factor making the method more competitive in practical…

Numerical Analysis · Mathematics 2025-01-10 Tao Wang , Xucheng Meng , Ran Zhang , Guanghui Hu

Accurately predicting friction in sliding interfaces that contain third body wear particles is critical for engineering applications such as sliding movement in pistons, bearings, or metal forming. We present a hierarchical multiscale…

Traditional models of wormlike chains in shear flows at finite temperature approximate the equation of motion via finite difference discretization (bead and rod models). We introduce here a new method based on a spectral representation in…

Soft Condensed Matter · Physics 2007-05-23 Chris H. Wiggins , Alberto Montesi , Matteo Pasquali

The breakdown of Lieb-Robinson bounds in local, non-Hermitian quantum systems opens up the possibility for a rich landscape of quantum many-body phenomenology. We elucidate this by studying information scrambling and quantum chaos in…

Quantum Physics · Physics 2023-10-18 Brian Barch , Namit Anand , Jeffrey Marshall , Eleanor Rieffel , Paolo Zanardi

Order strengthening in nickel-based superalloys is associated with the extra stress required for dislocations to bypass the $\gamma'$ precipitates distributed in the $\gamma$ matrix. A rich variety of bypass mechanism has been identified,…

Materials Science · Physics 2021-12-14 Sabyasachi Chatterjee , Yang Li , Giacomo Po

In this work we propose and analyze a novel Hybrid High-Order discretization of a class of (linear and) nonlinear elasticity models in the small deformation regime which are of common use in solid mechanics. The proposed method is valid in…

Numerical Analysis · Mathematics 2017-07-10 Michele Botti , Daniele Di Pietro , Pierre Sochala

Locomotion is typically studied either in continuous media where bodies and legs experience forces generated by the flowing medium, or on solid substrates dominated by friction. In the former, centralized coordination is believed to…

Biological Physics · Physics 2023-03-29 Baxi Chong , Juntao He , Shengkai Li , Eva Erickson , Kelimar Diaz , Tianyu Wang , Daniel Soto , Daniel I. Goldman

In this paper, we introduce a fictitious dynamics for describing the only fast relaxation of a stiff ordinary differential equation (ODE) system towards a stable low-dimensional invariant manifold in the phase-space (slow invariant manifold…

Statistical Mechanics · Physics 2025-10-01 Eliodoro Chiavazzo

A novel probabilistic approach for the design of mechanical structures with friction interfaces is proposed. The objective function is defined as the probability that a specified performance measure of the forced vibration response is…

Computational Engineering, Finance, and Science · Computer Science 2021-01-01 Malte Krack , Sebastian Tatzko , Lars Panning-von Scheidt , Jörg Wallaschek

Here we present a multiscale method to calculate the saddle point associated with the effective dynamics arising from a stochastic system which couples slow deterministic drift and fast stochastic dynamics. This problem is motivated by the…

Numerical Analysis · Mathematics 2017-08-25 Shuting Gu , Xiang Zhou

A popular method of force-directed graph drawing is multidimensional scaling using graph-theoretic distances as input. We present an algorithm to minimize its energy function, known as stress, by using stochastic gradient descent (SGD) to…

Computational Geometry · Computer Science 2018-06-29 Jonathan X. Zheng , Samraat Pawar , Dan F. M. Goodman

We formulate and study a stochastic model for the thermally-driven motion of interacting straight screw dislocations in a cylindrical domain with a convex polygonal cross-section. Motion is modelled as a Markov jump process, where waiting…

Analysis of PDEs · Mathematics 2017-01-18 Thomas Hudson

The conventional Hamming distance measurement captures only the short-time dynamics of the displacement between the uncorrelated random configurations. The minimum difference technique introduced by Tirnakli and Lyra [Int. J. Mod. Phys. C…

Statistical Mechanics · Physics 2008-08-19 Burhan Bakar , Ugur Tirnakli

In this paper we propose stochastic gradient-free methods and accelerated methods with momentum for solving stochastic optimization problems. All these methods rely on stochastic directions rather than stochastic gradients. We analyze the…

Optimization and Control · Mathematics 2020-01-15 Xiaopeng Luo , Xin Xu

In this paper, we present a phase field model for the self-climb motion of prismatic dislocation loops via vacancy pipe diffusion driven by elastic interactions. This conserved dynamics model is developed under the framework of the…

Materials Science · Physics 2020-12-04 Xiaohua Niu , Yang Xiang , Xiaodong Yan