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Modern natural language processing (NLP) methods employ self-supervised pretraining objectives such as masked language modeling to boost the performance of various application tasks. These pretraining methods are frequently extended with…

Computation and Language · Computer Science 2021-02-26 Nils Rethmeier , Isabelle Augenstein

Machine-Generated Text (MGT) detection, a task that discriminates MGT from Human-Written Text (HWT), plays a crucial role in preventing misuse of text generative models, which excel in mimicking human writing style recently. Latest proposed…

Computation and Language · Computer Science 2023-10-23 Xiaoming Liu , Zhaohan Zhang , Yichen Wang , Hang Pu , Yu Lan , Chao Shen

Despite exciting progress in causal language models, the expressiveness of the representations is largely limited due to poor discrimination ability. To remedy this issue, we present ContraCLM, a novel contrastive learning framework at both…

Because most of the scientific literature data is unmarked, it makes semantic representation learning based on unsupervised graph become crucial. At the same time, in order to enrich the features of scientific literature, a learning method…

Computation and Language · Computer Science 2023-11-02 Hongrui Gao , Yawen Li , Meiyu Liang , Zeli Guan , Zhe Xue

Adverse drug events (ADEs) are an important aspect of drug safety. Various texts such as biomedical literature, drug reviews, and user posts on social media and medical forums contain a wealth of information about ADEs. Recent studies have…

Computation and Language · Computer Science 2024-05-21 Shaoxiong Ji , Ya Gao , Pekka Marttinen

Molecular pretraining, which learns molecular representations over massive unlabeled data, has become a prominent paradigm to solve a variety of tasks in computational chemistry and drug discovery. Recently, prosperous progress has been…

Machine Learning · Computer Science 2022-10-03 Yanqiao Zhu , Dingshuo Chen , Yuanqi Du , Yingze Wang , Qiang Liu , Shu Wu

Research into deep learning models for molecular property prediction has primarily focused on the development of better Graph Neural Network (GNN) architectures. Though new GNN variants continue to improve performance, their modifications…

Quantitative Methods · Quantitative Biology 2021-11-23 Toni Sagayaraj , Carsten Eickhoff

Molecular representation learning (MRL) is a key step to build the connection between machine learning and chemical science. In particular, it encodes molecules as numerical vectors preserving the molecular structures and features, on top…

Quantitative Methods · Quantitative Biology 2023-11-30 Zhichun Guo , Kehan Guo , Bozhao Nan , Yijun Tian , Roshni G. Iyer , Yihong Ma , Olaf Wiest , Xiangliang Zhang , Wei Wang , Chuxu Zhang , Nitesh V. Chawla

In the rapidly evolving field of self-supervised learning on graphs, generative and contrastive methodologies have emerged as two dominant approaches. Our study focuses on masked feature reconstruction (MFR), a generative technique where a…

Machine Learning · Computer Science 2025-12-16 Jianyuan Bo , Yuan Fang

Advanced graph neural networks have shown great potentials in graph classification tasks recently. Different from node classification where node embeddings aggregated from local neighbors can be directly used to learn node labels, graph…

Machine Learning · Computer Science 2022-03-16 Hao Jia , Junzhong Ji , Minglong Lei

We study self-supervised learning on graphs using contrastive methods. A general scheme of prior methods is to optimize two-view representations of input graphs. In many studies, a single graph-level representation is computed as one of the…

Machine Learning · Computer Science 2021-07-22 Xinyi Xu , Cheng Deng , Yaochen Xie , Shuiwang Ji

Property prediction on molecular graphs is an important application of Graph Neural Networks. Recently, unlabeled molecular data has become abundant, which facilitates the rapid development of self-supervised learning for GNNs in the…

Machine Learning · Computer Science 2023-10-31 Kha-Dinh Luong , Ambuj Singh

We propose a framework for sequence-to-sequence contrastive learning (SeqCLR) of visual representations, which we apply to text recognition. To account for the sequence-to-sequence structure, each feature map is divided into different…

Computer Vision and Pattern Recognition · Computer Science 2020-12-22 Aviad Aberdam , Ron Litman , Shahar Tsiper , Oron Anschel , Ron Slossberg , Shai Mazor , R. Manmatha , Pietro Perona

Data augmentation has been demonstrated as an effective strategy for improving model generalization and data efficiency. However, due to the discrete nature of natural language, designing label-preserving transformations for text data tends…

Computation and Language · Computer Science 2020-10-20 Yanru Qu , Dinghan Shen , Yelong Shen , Sandra Sajeev , Jiawei Han , Weizhu Chen

In this paper, we introduce a self-supervised learning method to enhance the graph-level representations with the help of a set of subgraphs. For this purpose, we propose a universal framework to generate subgraphs in an auto-regressive way…

Machine Learning · Computer Science 2021-05-10 Chenguang Wang , Ziwen Liu

The progress made in code modeling has been tremendous in recent years thanks to the design of natural language processing learning approaches based on state-of-the-art model architectures. Nevertheless, we believe that the current…

Software Engineering · Computer Science 2022-02-22 Martin Weyssow , Houari Sahraoui , Bang Liu

Recent advancements in Graph Contrastive Learning (GCL) have demonstrated remarkable effectiveness in improving graph representations. However, relying on predefined augmentations (e.g., node dropping, edge perturbation, attribute masking)…

Machine Learning · Computer Science 2025-02-27 Khaled Mohammed Saifuddin , Shihao Ji , Esra Akbas

While contrastive learning is proven to be an effective training strategy in computer vision, Natural Language Processing (NLP) is only recently adopting it as a self-supervised alternative to Masked Language Modeling (MLM) for improving…

Computation and Language · Computer Science 2021-09-16 Hooman Sedghamiz , Shivam Raval , Enrico Santus , Tuka Alhanai , Mohammad Ghassemi

Molecule and text representation learning has gained increasing interest due to its potential for enhancing the understanding of chemical information. However, existing models often struggle to capture subtle differences between molecules…

Machine Learning · Computer Science 2025-10-31 Hyuntae Park , Yeachan Kim , SangKeun Lee

Multimodal contrastive learning is a methodology for linking different data modalities; the canonical example is linking image and text data. The methodology is typically framed as the identification of a set of encoders, one for each…

Machine Learning · Statistics 2025-06-02 Ricardo Baptista , Andrew M. Stuart , Son Tran
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