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Deep learning has transformed the way large and complex image datasets can be processed, reshaping what is possible in bioimage analysis. As the complexity and size of bioimage data continues to grow, this new analysis paradigm is becoming…

Quantitative Methods · Quantitative Biology 2021-08-03 Adrien Hallou , Hannah Yevick , Bianca Dumitrascu , Virginie Uhlmann

Deep learning has received extensive research interest in developing new medical image processing algorithms, and deep learning based models have been remarkably successful in a variety of medical imaging tasks to support disease detection…

Computer Vision and Pattern Recognition · Computer Science 2022-04-12 Xuxin Chen , Ximin Wang , Ke Zhang , Kar-Ming Fung , Theresa C. Thai , Kathleen Moore , Robert S. Mannel , Hong Liu , Bin Zheng , Yuchen Qiu

Deep Learning (DL) has become a crucial technology for Artificial Intelligence (AI). It is a powerful technique to automatically extract high-level features from complex data which can be exploited for applications such as computer vision,…

Computer Vision and Pattern Recognition · Computer Science 2019-06-10 Gael Kamdem De Teyou

The emergence of artificial intelligence (AI), particularly deep learning (DL), has marked a new era in the realm of ophthalmology, offering transformative potential for the diagnosis and treatment of posterior segment eye diseases. This…

Image and Video Processing · Electrical Eng. & Systems 2025-01-09 Duy M. H. Nguyen , Hasan Md Tusfiqur Alam , Tai Nguyen , Devansh Srivastav , Hans-Juergen Profitlich , Ngan Le , Daniel Sonntag

The complexity of human biology and its intricate systems holds immense potential for advancing human health, disease treatment, and scientific discovery. However, traditional manual methods for studying biological interactions are often…

Other Quantitative Biology · Quantitative Biology 2025-01-24 Himanshu Buckchash , Gyanendra Kumar Verma , Dilip K. Prasad

Microscopy image enhancement plays a pivotal role in understanding the details of biological cells and materials at microscopic scales. In recent years, there has been a significant rise in the advancement of microscopy image enhancement,…

Image and Video Processing · Electrical Eng. & Systems 2025-09-29 Debasish Dutta , Neeharika Sonowal , Risheraj Barauh , Deepjyoti Chetia , Sanjib Kr Kalita

Cells count become a challenging problem when the cells move in a continuous stream, and their boundaries are difficult for visual detection. To resolve this problem we modified the training and decision making processes using curriculum…

Computer Vision and Pattern Recognition · Computer Science 2024-04-17 Danil Afonchikov , Elena Kornaeva , Irina Makovik , Alexey Kornaev

Deep learning algorithms have seen acute growth of interest in their applications throughout several fields of interest in the last decade, with medical hyperspectral imaging being a particularly promising domain. So far, to the best of our…

Image and Video Processing · Electrical Eng. & Systems 2021-06-10 Uzair Khan , Paheding Sidike , Colin Elkin , Vijay Devabhaktuni

Recent technological advancements in data acquisition tools allowed life scientists to acquire multimodal data from different biological application domains. Broadly categorized in three types (i.e., sequences, images, and signals), these…

Quantitative Methods · Quantitative Biology 2020-03-03 Mufti Mahmud , M Shamim Kaiser , Amir Hussain

As an important data selection schema, active learning emerges as the essential component when iterating an Artificial Intelligence (AI) model. It becomes even more critical given the dominance of deep neural network based models, which are…

Machine Learning · Computer Science 2022-12-27 Rinyoichi Takezoe , Xu Liu , Shunan Mao , Marco Tianyu Chen , Zhanpeng Feng , Shiliang Zhang , Xiaoyu Wang

Deep Learning has shown great success in reshaping medical imaging, yet it faces numerous challenges hindering widespread application. Issues like catastrophic forgetting and distribution shifts in the continuously evolving data stream…

Computer Vision and Pattern Recognition · Computer Science 2024-10-02 Mohammad Areeb Qazi , Anees Ur Rehman Hashmi , Santosh Sanjeev , Ibrahim Almakky , Numan Saeed , Camila Gonzalez , Mohammad Yaqub

Single-cell technologies are revolutionizing the entire field of biology. The large volumes of data generated by single-cell technologies are high-dimensional, sparse, heterogeneous, and have complicated dependency structures, making…

Efficient analysis and processing of dental images are crucial for dentists to achieve accurate diagnosis and optimal treatment planning. However, dental imaging inherently poses several challenges, such as low contrast, metallic artifacts,…

Computer Vision and Pattern Recognition · Computer Science 2025-10-24 Zhenhuan Zhou , Jingbo Zhu , Yuchen Zhang , Xiaohang Guan , Peng Wang , Tao Li

Video microscopy has a long history of providing insights and breakthroughs for a broad range of disciplines, from physics to biology. Image analysis to extract quantitative information from video microscopy data has traditionally relied on…

Image and Video Processing · Electrical Eng. & Systems 2024-06-12 Benjamin Midtvedt , Saga Helgadottir , Aykut Argun , Jesús Pineda , Daniel Midtvedt , Giovanni Volpe

Molecular dynamics (MD) has become a powerful tool for studying biophysical systems, due to increasing computational power and availability of software. Although MD has made many contributions to better understanding these complex…

Computational Physics · Physics 2019-09-27 Yihang Wang , Joao Marcelo Lamim Ribeiro , Pratyush Tiwary

Deep learning (DL) has emerged as a leading approach in accelerating MR imaging. It employs deep neural networks to extract knowledge from available datasets and then applies the trained networks to reconstruct accurate images from limited…

Image and Video Processing · Electrical Eng. & Systems 2024-02-06 Shanshan Wang , Ruoyou Wu , Sen Jia , Alou Diakite , Cheng Li , Qiegen Liu , Leslie Ying

Deep learning (DL) has recently emerged as a pivotal technology for enhancing magnetic resonance imaging (MRI), a critical tool in diagnostic radiology. This review paper provides a comprehensive overview of recent advances in DL for MRI…

Machine Learning · Computer Science 2024-04-25 Reinhard Heckel , Mathews Jacob , Akshay Chaudhari , Or Perlman , Efrat Shimron

Deep learning (DL) is one of the fastest growing topics in materials data science, with rapidly emerging applications spanning atomistic, image-based, spectral, and textual data modalities. DL allows analysis of unstructured data and…

Even though active learning forms an important pillar of machine learning, deep learning tools are not prevalent within it. Deep learning poses several difficulties when used in an active learning setting. First, active learning (AL)…

Machine Learning · Computer Science 2017-03-09 Yarin Gal , Riashat Islam , Zoubin Ghahramani

Machine learning (ML), deep learning (DL), and artificial intelligence (AI) are of increasing importance in biomedicine. The goal of this work is to show progress in ML in digital health, to exemplify future needs and trends, and to…

Artificial Intelligence · Computer Science 2019-11-19 Fabian V. Filipp
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