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Group testing is a long studied problem in combinatorics: A small set of $r$ ill people should be identified out of the whole ($n$ people) by using only queries (tests) of the form "Does set X contain an ill human?". In this paper we…

Data Structures and Algorithms · Computer Science 2008-04-29 Ely Porat , Amir Rothschild

In the group-testing literature, efficient algorithms have been developed to minimize the number of tests required to identify all minimal "defective" sub-groups embedded within a larger group, using deterministic group splitting with a…

Discrete Mathematics · Computer Science 2020-10-20 Laurence A. Clarfeld , Margaret J. Eppstein

Group testing is a well-known search problem that consists in detecting of $s$ defective members of a set of $t$ samples by carrying out tests on properly chosen subsets of samples. In classical group testing the goal is to find all…

Information Theory · Computer Science 2020-05-19 Ilya Vorobyev

We propose a novel infection spread model based on a random connection graph which represents connections between $n$ individuals. Infection spreads via connections between individuals and this results in a probabilistic cluster formation…

Information Theory · Computer Science 2022-03-30 Batuhan Arasli , Sennur Ulukus

In network tomography, one goal is to identify a small set of failed links in a network, by sending a few packets through the network and seeing which reach their destination. This problem can be seen as a variant of combinatorial group…

Information Theory · Computer Science 2018-09-12 Bruce Spang , Mary Wootters

In applications of group testing in networks, e.g. identifying individuals who are infected by a disease spread over a network, exploiting correlation among network nodes provides fundamental opportunities in reducing the number of tests…

Information Theory · Computer Science 2023-03-21 Hesam Nikpey , Jungyeol Kim , Xingran Chen , Saswati Sarkar , Shirin Saeedi Bidokhti

The motivation for this paper comes from the ongoing SARS-CoV-2 Pandemic. Its goal is to present a previously neglected approach to non-adaptive group testing and describes it in terms of residuated pairs on partially ordered sets. Our…

Other Statistics · Statistics 2022-02-15 Marcus Greferath , Cornelia Roessing

We consider the problem of identifying the defectives from a population of items via a non-adaptive group testing framework with a random pooling-matrix design. We analyze the sufficient number of tests needed for approximate set…

Information Theory · Computer Science 2024-12-03 Sameera Bharadwaja H. , Chandra R. Murthy

Group testing algorithms are very useful tools for DNA library screening. Building on recent work by Levenshtein (2003) and Tonchev (2008), we construct in this paper new infinite classes of combinatorial structures, the existence of which…

Discrete Mathematics · Computer Science 2011-06-21 Michael Huber

The goal of group testing is to efficiently identify a few specific items, called positives, in a large population of items via tests. A test is an action on a subset of items which returns positive if the subset contains at least one…

Information Theory · Computer Science 2021-11-08 Thach V. Bui , Mahdi Cheraghchi , An T. H. Nguyen , Thuc D. Nguyen

Accurate detection of infected individuals is one of the critical steps in stopping any pandemic. When the underlying infection rate of the disease is low, testing people in groups, instead of testing each individual in the population, can…

Group testing is an approach aimed at identifying up to $d$ defective items among a total of $n$ elements. This is accomplished by examining subsets to determine if at least one defective item is present. In our study, we focus on the…

Data Structures and Algorithms · Computer Science 2023-07-12 Nader H. Bshouty , Catherine A. Haddad-Zaknoon

This paper considers the problem of Quantitative Group Testing (QGT) where there are some defective items among a large population of $N$ items. We consider the scenario in which each item is defective with probability $K/N$, independently…

Information Theory · Computer Science 2019-10-16 Esmaeil Karimi , Fatemeh Kazemi , Anoosheh Heidarzadeh , Krishna R. Narayanan , Alex Sprintson

In this paper, we propose algorithms that leverage a known community structure to make group testing more efficient. We consider a population organized in disjoint communities: each individual participates in a community, and its infection…

Information Theory · Computer Science 2021-03-18 Pavlos Nikolopoulos , Tao Guo , Sundara Rajan Srinivasavaradhan , Christina Fragouli , Suhas Diggavi

Non-adaptive group testing refers to the problem of inferring a sparse set of defectives from a larger population using the minimum number of simultaneous pooled tests. Recent positive results for noiseless group testing have motivated the…

Information Theory · Computer Science 2021-07-16 Gabriel Arpino , Nicolò Grometto , Afonso S. Bandeira

In this paper, an information theoretic analysis on non-adaptive group testing schemes based on sparse pooling graphs is presented. The binary status of the objects to be tested are modeled by i.i.d. Bernoulli random variables with…

Information Theory · Computer Science 2013-04-29 Tadashi Wadayama

Grebinski and Kucherov (1998) and Alon et al. (2004-2005) study the problem of learning a hidden graph for some especial cases, such as hamiltonian cycle, cliques, stars, and matchings. This problem is motivated by problems in chemical…

Data Structures and Algorithms · Computer Science 2023-06-22 Hamid Kameli

In the group testing problem we aim to identify a small number of infected individuals within a large population. We avail ourselves to a procedure that can test a group of multiple individuals, with the test result coming out positive iff…

Discrete Mathematics · Computer Science 2021-05-14 Amin Coja-Oghlan , Oliver Gebhard , Max Hahn-Klimroth , Philipp Loick

In nonadaptive group testing, the main research objective is to design an efficient algorithm to identify a set of up to $t$ positive elements among $n$ samples with as few tests as possible. Disjunct matrices and separable matrices are two…

Combinatorics · Mathematics 2021-10-15 Bingchen Qian , Xin Wang , Gennian Ge

We consider a zero-error probabilistic group testing problem where individuals are defective independently but not with identical probabilities. We propose a greedy set formation method to build sets of individuals to be tested together. We…

Information Theory · Computer Science 2021-08-30 Mustafa Doger , Sennur Ulukus