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Cardiac Magnetic Resonance (CMR) imaging is widely used for heart model reconstruction and digital twin computational analysis because of its ability to visualize soft tissues and capture dynamic functions. However, CMR images have an…

Cardiovascular diseases stand as the primary global cause of mortality. Among the various imaging techniques available for visualising the heart and evaluating its function, echocardiograms emerge as the preferred choice due to their safety…

Image and Video Processing · Electrical Eng. & Systems 2023-11-22 Adil Dahlan , Cyril Zakka , Abhinav Kumar , Laura Tang , Rohan Shad , Robyn Fong , William Hiesinger

Motivation Protein fold recognition is an important problem in structural bioinformatics. Almost all traditional fold recognition methods use sequence (homology) comparison to indirectly predict the fold of a tar get protein based on the…

Machine Learning · Computer Science 2017-06-06 Jie Hou , Badri Adhikari , Jianlin Cheng

We combine confocal imaging, microfluidics and image analysis to record 3D-images of cells in flow. This enables us to recover the full 3D representation of several hundred living cells per minute. Whereas 3D confocal imaging has thus far…

Fluid Dynamics · Physics 2017-09-19 S. Quint , A. F. Christ , A. Guckenberger , S. Himbert , L. Kaestner , S. Gekle , C. Wagner

Hemodynamics in the aorta from computational fluid dynamics (CFD) simulations can provide a comprehensive analysis of relevant cardiovascular diseases. Coupling the three-element Windkessel model with the patient-specific CFD simulation to…

Fluid Dynamics · Physics 2022-07-14 Zongze Li , Wenbin Mao

Higher-order tensor decompositions have hardly been used in muscle activity analysis despite multichannel electromyography (EMG) datasets naturally occurring as multi-way structures. Here, we seek to demonstrate and discuss the potential of…

Signal Processing · Electrical Eng. & Systems 2019-03-26 Ahmed Ebied , Eli Kinney-lang , Loukianos Spyrou , Javier Escudero

Time-evolving magnetohydrodynamic (MHD) coronal modeling, driven by a series of time-dependent photospheric magnetograms, represents a new generation of coronal simulations. This approach offers greater realism compared to traditional…

An efficient and effective decoding mechanism is crucial in medical image segmentation, especially in scenarios with limited computational resources. However, these decoding mechanisms usually come with high computational costs. To address…

Image and Video Processing · Electrical Eng. & Systems 2024-05-14 Md Mostafijur Rahman , Mustafa Munir , Radu Marculescu

Brightness mode (B-mode) ultrasound is a common imaging modality in the clinical assessment of several cardiovascular diseases. The utility of ultrasound-based functional indices such as the ejection fraction (EF) and stroke volume (SV) is…

Medical Physics · Physics 2024-09-10 Tanmay Mukherjee , Sunder Neelakantan , Kyle Myers , Carl Tong , Reza Avazmohammadi

Four-dimensional (4D) left ventricular myocardial velocity mapping (MVM) is a cardiac magnetic resonance (CMR) technique that allows assessment of cardiac motion in three orthogonal directions. Accurate and reproducible delineation of the…

Image and Video Processing · Electrical Eng. & Systems 2020-12-23 Yinzhe Wu , Suzan Hatipoglu , Diego Alonso-Álvarez , Peter Gatehouse , David Firmin , Jennifer Keegan , Guang Yang

Learning spatial-temporal correspondences in cardiac motion from images is important for understanding the underlying dynamics of cardiac anatomical structures. Many methods explicitly impose smoothness constraints such as the…

Image and Video Processing · Electrical Eng. & Systems 2022-09-05 Xiaoran Zhang , Chenyu You , Shawn Ahn , Juntang Zhuang , Lawrence Staib , James Duncan

Motion remains a major challenge in magnetic resonance (MR) imaging, particularly in free-breathing cardiac MR imaging, where data are acquired over multiple heartbeats at varying respiratory phases. We adopt a model-based approach for…

Image and Video Processing · Electrical Eng. & Systems 2025-01-29 Kwang Eun Jang , Mario O. Malavé , Dwight G. Nishimura

Myocardial infarction (MI) is the leading cause of mortality and morbidity in the world. Early therapeutics of MI can ensure the prevention of further myocardial necrosis. Echocardiography is the fundamental imaging technique that can…

Image and Video Processing · Electrical Eng. & Systems 2023-08-29 Aysen Degerli , Fahad Sohrab , Serkan Kiranyaz , Moncef Gabbouj

In this paper, we propose a new deep learning framework for an automatic myocardial infarction evaluation from clinical information and delayed enhancement-MRI (DE-MRI). The proposed framework addresses two tasks. The first task is…

Image and Video Processing · Electrical Eng. & Systems 2020-11-02 Kibrom Berihu Girum , Youssef Skandarani , Raabid Hussain , Alexis Bozorg Grayeli , Gilles Créhange , Alain Lalande

Cardiac motion estimation is an important diagnostic tool to detect heart diseases and it has been explored with modalities such as MRI and conventional ultrasound (US) sequences. US cardiac motion estimation still presents challenges…

Computer Vision and Pattern Recognition · Computer Science 2017-04-26 Angelica I. Aviles , Thomas Widlak , Alicia Casals , Maartje M. Nillesen , Habib Ammari

Purpose: The mechanics of the mitral valve leaflet as a nonlinear, inelastic and anisotropic soft tissue results from an integrated response of many mathematical/physical indexes' that illustrate the tissue. In the past decade, finite…

Medical Physics · Physics 2015-06-24 Mersedeh Karvandi , Saeed Ranjbar , Seyed Ahmad Hassantash , Mahnoosh Foroughi

We introduce IntFold, a controllable foundation model for general and specialized biomolecular structure prediction. Utilizing a high-performance custom attention kernel, IntFold achieves accuracy comparable to the state-of-the-art…

Biomolecules · Quantitative Biology 2025-07-08 The IntFold Team , Leon Qiao , Wayne Bai , He Yan , Gary Liu , Nova Xi , Xiang Zhang , Siqi Sun

Accurate representation of myocardial infarct geometry is crucial for patient-specific cardiac modeling in MI patients. While Late gadolinium enhancement (LGE) MRI is the clinical gold standard for infarct detection, it requires contrast…

Image and Video Processing · Electrical Eng. & Systems 2025-07-22 Yilin Lyu , Fan Yang , Xiaoyue Liu , Zichen Jiang , Joshua Dillon , Debbie Zhao , Martyn Nash , Charlene Mauger , Alistair Young , Ching-Hui Sia , Mark YY Chan , Lei Li

Coronary artery disease (CAD) remains a leading cause of mortality worldwide, requiring accurate segmentation and stenosis detection using Coronary Computed Tomography angiography (CCTA). Existing methods struggle with challenges such as…

Computer Vision and Pattern Recognition · Computer Science 2025-04-29 Ni Yao , Xiangyu Liu , Danyang Sun , Chuang Han , Yanting Li , Jiaofen Nan , Chengyang Li , Fubao Zhu , Weihua Zhou , Chen Zhao

Cardiac magnetic resonance imaging (MRI) is a pivotal tool for assessing cardiac function. Precise segmentation of cardiac structures is imperative for accurate cardiac functional evaluation. This paper introduces a semi-supervised model…

Image and Video Processing · Electrical Eng. & Systems 2024-05-24 Hejun Huang , Zuguo Chen , Yi Huang , Guangqiang Luo , Chaoyang Chen , Youzhi Song
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