Related papers: Error Analysis of Virtual Element Method for the P…
A variational approach is used to develop a robust numerical procedure for solving the nonlinear Poisson-Boltzmann equation. Following Maggs et al., we construct an appropriate constrained free energy functional, such that its…
We extend the conforming virtual element method to the numerical resolution of eigenvalue problems with potential terms on a polytopal mesh. An important application is that of the Schrodinger equation with a pseudopotential term. This…
We present a simple and efficient MATLAB implementation of the linear virtual element method for the three dimensional Poisson equation. The purpose of this software is primarily educational, to demonstrate how the key components of the…
In the present work we propose and analyze a fully coupled virtual element method of high order for solving the two dimensional nonstationary Boussinesq system in terms of the stream-function and temperature fields. The discretization for…
In the present work, we analyze the $hp$ version of Virtual Element methods for the 2D Poisson problem. We prove exponential convergence of the energy error employing sequences of polygonal meshes geometrically refined, thus extending the…
In the present paper we introduce a Virtual Element Method (VEM) for the approximate solution of general linear second order elliptic problems in mixed form, allowing for variable coefficients. We derive a theoretical convergence analysis…
We explore the recently-proposed Virtual Element Method (VEM) for numerical solution of boundary value problems on arbitrary polyhedral meshes. More specifically, we focus on the elasticity equations in three-dimensions and elaborate upon…
We present a nonlocal electrostatic formulation of nonuniform ions and water molecules with interstitial voids that uses a Fermi-like distribution to account for steric and correlation effects in electrolyte solutions. The formulation is…
In this paper we consider the Virtual Element discretization of a minimal surface problem, a quasi-linear elliptic partial differential equation modeling the problem of minimizing the area of a surface subject to a prescribed boundary…
We analyze and validate the virtual element method combined with a boundary correction similar to the one in [1,2], to solve problems on two dimensional domains with curved boundaries approximated by polygonal domains. We focus on the case…
We present a velocity-based moving mesh virtual element method for the numerical solution of PDEs involving moving boundaries. The virtual element method is used for computing both the mesh velocity and a conservative Arbitrary…
Consider the Poisson equation with the Dirichlet boundary condition on a three-dimensional polyhedral domain. For singular solutions from the non-smoothness of the domain boundary, we propose new anisotropic tetrahedral mesh refinement…
We design a virtual element method for the numerical treatment of the two-dimensional parabolic variational inequality problem on unstructured polygonal meshes. Due to the expected low regularity of the exact solution, the virtual element…
We present the theory and implementation of a Poisson-Boltzmann implicit solvation model for electrolyte solutions. This model can be combined with arbitrary electronic structure methods that provide an accurate charge density of the…
The nonlinear Poisson-Boltzmann equation (NPBE) is an elliptic partial differential equation used in applications such as protein interactions and biophysical chemistry (among many others). It describes the nonlinear electrostatic potential…
We analyze in this paper a virtual element approximation for the acoustic vibration problem. We consider a variational formulation relying only on the fluid displacement and propose a discretization by means of H(div) virtual elements with…
Poisson's equation has been used in VLSI global placement for describing the potential field caused by a given charge density distribution. Unlike previous global placement methods that solve Poisson's equation numerically, in this paper,…
We derive an anisotropic a posteriori error estimate for the adaptive conforming Virtual Element approximation of a paradigmatic two-dimensional elliptic problem. In particular, we introduce a quasi-interpolant operator and exploit its…
We prove several optimal-order error estimates for a finite-element method applied to an inhomogeneous Robin boundary value problem (BVP) for the Poisson equation defined in a smooth bounded domain in $\mathbb{R}^n$, $n=2,3$. The boundary…
An accurate force calculation with the Poisson-Boltzmann equation is challenging, as it requires the electric field on the molecular surface. Here, we present a calculation of the electric field on the solute-solvent interface that is exact…