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Early detection of cancer is crucial for treatment and overall patient survival. In the upper aerodigestive tract (UADT) the gold standard for identification of malignant tissue is an invasive biopsy. Recently, non-invasive imaging…
Accurate endoscopic image segmentation on the polyps is critical for early colorectal cancer detection. However, this task remains challenging due to low contrast with surrounding mucosa, specular highlights, and indistinct boundaries. To…
Medical image segmentation is the technique that helps doctor view and has a precise diagnosis, particularly in Colorectal Cancer. Specifically, with the increase in cases, the diagnosis and identification need to be faster and more…
Colorectal cancer contributes significantly to cancer-related mortality. Timely identification and elimination of polyps through colonoscopy screening is crucial in order to decrease mortality rates. Accurately detecting polyps in…
The gut microbiome, crucial for human health, presents challenges in analyzing its complex metaomic data due to high dimensionality and sparsity. Traditional methods struggle to capture its intricate relationships. We investigate graph…
Examining and interpreting of a large number of wireless endoscopic images from the gastrointestinal tract is a tiresome task for physicians. A practical solution is to automatically construct a two dimensional representation of the…
Colorectal cancer from the appearance of polyps that can be benign or malignant is one of the most fatal diseases in the world. To find these polyps in patients, colonoscopy is performed, which is a very efficient technique in this case.…
Precise segmentation of medical images is fundamental for extracting critical clinical information, which plays a pivotal role in enhancing the accuracy of diagnoses, formulating effective treatment plans, and improving patient outcomes.…
Colorectal cancer (CRC) is closely linked to the malignant transformation of colorectal polyps, making early detection essential. However, current models struggle with detecting small lesions, accurately localizing boundaries, and providing…
Histopathologic diagnosis relies on simultaneous integration of information from a broad range of scales, ranging from nuclear aberrations ($\approx \mathcal{O}(0.1{\mu m})$) through cellular structures ($\approx \mathcal{O}(10{\mu m})$) to…
Objective: To develop a novel deep learning framework for the automated segmentation of colonic polyps in colonoscopy images, overcoming the limitations of current approaches in preserving precise polyp boundaries, incorporating multi-scale…
In clinical practice, regions of interest in medical imaging often need to be identified through a process of precise image segmentation. The quality of this image segmentation step critically affects the subsequent clinical assessment of…
We develop a novel ultrasound nasogastric tube (UNGT) dataset to address the lack of public nasogastric tube datasets. The UNGT dataset includes 493 images gathered from 110 patients with an average image resolution of approximately 879…
The high cure rate of cancer is inextricably linked to physicians' accuracy in diagnosis and treatment, therefore a model that can accomplish high-precision tumor segmentation has become a necessity in many applications of the medical…
Lung and colon cancer are serious worldwide health challenges that require early and precise identification to reduce mortality risks. However, diagnosis, which is mostly dependent on histopathologists' competence, presents difficulties and…
Accurate classification of medical images is critical for detecting abnormalities in the gastrointestinal tract, a domain where misclassification can significantly impact patient outcomes. We propose an ensemble-based approach to improve…
Colonoscopy is considered the most effective screening test to detect colorectal cancer (CRC) and its precursor lesions, i.e., polyps. However, the procedure experiences high miss rates due to polyp heterogeneity and inter-observer…
Longitudinal MRI analysis is crucial for predicting disease outcomes, particularly in chronic conditions like hepatocellular carcinoma (HCC), where early detection can significantly influence treatment strategies and patient prognosis. Yet,…
In this work for Capsule Vision Challenge 2024, we addressed the challenge of multiclass anomaly classification in video capsule Endoscopy (VCE)[1] with a variety of deep learning models, ranging from custom CNNs to advanced transformer…
Colonoscopy is a gold standard procedure but is highly operator-dependent. Automated polyp segmentation, a precancerous precursor, can minimize missed rates and timely treatment of colon cancer at an early stage. Even though there are deep…