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Graphs are a natural representation of brain activity derived from functional magnetic imaging (fMRI) data. It is well known that clusters of anatomical brain regions, known as functional connectivity networks (FCNs), encode temporal…

Machine Learning · Computer Science 2023-01-30 Alexander Campbell , Simeon Spasov , Nicola Toschi , Pietro Lio

While deep learning has revolutionized the prediction of rigid protein structures, modelling the conformational ensembles of Intrinsically Disordered Proteins (IDPs) remains a key frontier. Current AI paradigms present a trade-off: Protein…

Biomolecules · Quantitative Biology 2025-12-19 Eoin Quinn , Marco Carobene , Jean Quentin , Sebastien Boyer , Miguel Arbesú , Oliver Bent

In modern collider experiments, the quest to explore fundamental interactions between elementary particles has reached unparalleled levels of precision. Signatures from particle physics detectors are low-level objects (such as energy…

Instrumentation and Detectors · Physics 2024-07-16 Baran Hashemi , Claudius Krause

Foundation models are large-scale machine learning models that are pre-trained on massive amounts of data and can be adapted for various downstream tasks. They have been extensively applied to tasks in Natural Language Processing and…

The analysis of electrophysiological data is crucial for certain surgical procedures such as deep brain stimulation, which has been adopted for the treatment of a variety of neurological disorders. During the procedure, auditory analysis of…

Machine Learning · Computer Science 2025-03-24 Thibault Martin , Paul Sauleau , Claire Haegelen , Pierre Jannin , John S. H. Baxter

Respiratory ailments afflict a wide range of people and manifests itself through conditions like asthma and sleep apnea. Continuous monitoring of chronic respiratory ailments is seldom used outside the intensive care ward due to the large…

While capable of segregating visual data, humans take time to examine a single piece, let alone thousands or millions of samples. The deep learning models efficiently process sizeable information with the help of modern-day computing.…

Computer Vision and Pattern Recognition · Computer Science 2022-09-28 Alankrit Mishra , Nikhil Raj , Garima Bajwa

Electrocardiography is a very common, non-invasive diagnostic procedure and its interpretation is increasingly supported by automatic interpretation algorithms. The progress in the field of automatic ECG interpretation has up to now been…

Machine Learning · Computer Science 2020-04-29 Nils Strodthoff , Patrick Wagner , Tobias Schaeffter , Wojciech Samek

Decoding neural activity into human-interpretable representations is a key research direction in brain-computer interfaces (BCIs) and computational neuroscience. Recent progress in machine learning and generative AI has driven growing…

Artificial Intelligence · Computer Science 2025-12-02 Shreya Shukla , Jose Torres , Akshaj Murhekar , Christina Liu , Abhijit Mishra , Jacek Gwizdka , Shounak Roychowdhury

In the past decade, deep conditional generative models have revolutionized the generation of realistic images, extending their application from entertainment to scientific domains. Single-particle cryo-electron microscopy (cryo-EM) is…

Computer Vision and Pattern Recognition · Computer Science 2024-10-01 Jiakai Zhang , Qihe Chen , Yan Zeng , Wenyuan Gao , Xuming He , Zhijie Liu , Jingyi Yu

Electroencephalography foundation models (EEG-FMs) have advanced brain signal analysis, but the lack of standardized evaluation benchmarks impedes model comparison and scientific progress. Current evaluations rely on inconsistent protocols…

Signal Processing · Electrical Eng. & Systems 2026-02-16 Wei Xiong , Jiangtong Li , Jie Li , Kun Zhu , Changjun Jiang

The present study introduces an innovative approach to the synthesis of Electroencephalogram (EEG) signals by integrating diffusion models with reinforcement learning. This integration addresses key challenges associated with traditional…

Signal Processing · Electrical Eng. & Systems 2024-10-02 Yang An , Yuhao Tong , Weikai Wang , Steven W. Su

Analysis of the structure of biological networks often uses statistical tests to establish the over-representation of motifs, which are thought to be important building blocks of such networks, related to their biological functions.…

Molecular Networks · Quantitative Biology 2021-11-24 Alex Stivala , Alessandro Lomi

This paper presents a computational solution that enables continuous cardiac monitoring through cross-modality inference of electrocardiogram (ECG). While some smartwatches now allow users to obtain a 30-second ECG test by tapping a…

Signal Processing · Electrical Eng. & Systems 2024-05-20 Yuenan Li , Xin Tian , Qiang Zhu , Min Wu

Specialized foundation models are beginning to emerge in various medical subdomains, but pretraining methodologies and parametric scaling with the size of the pretraining dataset are rarely assessed systematically and in a like-for-like…

Signal Processing · Electrical Eng. & Systems 2026-05-13 M A Al-Masud , Nils Strodthoff

In this paper, a new signal model is suggested for parametric representation of the electroencephalogram (EEG) signals. The proposed model which is an amplitude and frequency modulated sinusoidal signal model, has been found to capture the…

Signal Processing · Electrical Eng. & Systems 2018-12-24 Rakesh K. Sharma , Pradip Sircar

Exponential random graph models (ERGMs) are a widely used framework for network data, enabling hypothesis testing on the structural mechanisms underlying observed networks. Bayesian ERGMs provide principled uncertainty quantification and…

Methodology · Statistics 2026-05-26 Alberto Caimo , Isabella Gollini

Electroencephalogram (EEG) classification has been widely used in various medical and engineering applications, where it is important for understanding brain function, diagnosing diseases, and assessing mental health conditions. However,…

Signal Processing · Electrical Eng. & Systems 2024-08-20 Mingzhi Chen , Yiyu Gui , Yuqi Su , Yuesheng Zhu , Guibo Luo , Yuchao Yang

Biomedical signals aid in the diagnosis of different disorders and abnormalities. When targeting lossy compression of such signals, the medically relevant information that lies within the data should maintain its accuracy and thus its…

Information Theory · Computer Science 2024-10-30 Hoda Daou , Fabrice Labeau

Regeneration of the nervous system after injury remains an important therapeutic objective, especially in the central nervous system (CNS), in which regeneration is restricted by both neuronal limitations as well as adverse extracellular…

Neurons and Cognition · Quantitative Biology 2026-05-05 Maryam Kheyrollah , Reza Khanbabaie , Chris Ullrich , Mohammad Moulaeifard