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Autism spectrum disorder (ASD) is associated with atypical large-scale brain organization, yet the functional principles underlying these alterations remain incompletely understood. We examined whether coevolutionary balance, a…

Neurons and Cognition · Quantitative Biology 2026-02-17 S. Rezaei Afshar , G. Reza Jafari

The relative importance of the intrinsic and extrinsic factors determining the variety of geometric shapes exhibited by dendritic trees remains unclear. This question was addressed by developing a model of the growth of dendritic trees…

Neurons and Cognition · Quantitative Biology 2007-05-23 Artur Luczak

Several fundamental properties of real complex networks, such as the small-world effect, the scale-free degree distribution, and recently discovered topological fractal structure, have presented the possibility of a unique growth mechanism…

Data Analysis, Statistics and Probability · Physics 2009-11-13 Liuhua Zou , Wenjiang Pei , Tao Li , Zhenya He , Yiuming Cheung

Understanding the nature of the changes exhibited by evolving neuronal dynamics from high-dimensional activity data is essential for advancing neuroscience, particularly in the study of neuronal network development and the pathophysiology…

Neurons and Cognition · Quantitative Biology 2025-03-03 Ho Fai Po , Akke Mats Houben , Anna-Christina Haeb , Yordan P. Raykov , Daniel Tornero , Jordi Soriano , David Saad

The brain must robustly store a large number of memories, corresponding to the many events encountered over a lifetime. However, the number of memory states in existing neural network models either grows weakly with network size or recall…

Neurons and Cognition · Quantitative Biology 2017-11-06 Rishidev Chaudhuri , Ila Fiete

We describe a kernel of size 9k-8 for the NP-hard problem of computing the Tree Bisection and Reconnect (TBR) distance k between two unrooted binary phylogenetic trees. We achieve this by extending the existing portfolio of reduction rules…

Data Structures and Algorithms · Computer Science 2022-09-21 Steven Kelk , Simone Linz , Ruben Meuwese

Grid cells in the entorhinal cortex fire when animals that are exploring a certain region of space occupy the vertices of a triangular grid that spans the environment. Different neurons feature triangular grids that differ in their…

Neurons and Cognition · Quantitative Biology 2017-01-04 Alessandro Sanzeni , Vijay Balasubramanian , Guido Tiana , Massimo Vergassola

We use branes to generalize the Distance Conjecture. We conjecture that in any infinite-distance limit in the moduli space of a $d$-dimensional quantum gravity theory, among the set of particle towers and fundamental branes with at most…

High Energy Physics - Theory · Physics 2024-07-31 Muldrow Etheredge , Ben Heidenreich , Tom Rudelius

Many approaches in machine learning rely on a weighted graph to encode the similarities between samples in a dataset. Entropic affinities (EAs), which are notably used in the popular Dimensionality Reduction (DR) algorithm t-SNE, are…

Machine Learning · Computer Science 2023-10-31 Hugues Van Assel , Titouan Vayer , Rémi Flamary , Nicolas Courty

Group-based brain connectivity networks have great appeal for researchers interested in gaining further insight into complex brain function and how it changes across different mental states and disease conditions. Accurately constructing…

Applications · Statistics 2013-03-05 Sean L. Simpson , Malaak N. Moussa , Paul J. Laurienti

Many biological learning systems such as the mushroom body, hippocampus, and cerebellum are built from sparsely connected networks of neurons. For a new understanding of such networks, we study the function spaces induced by sparse random…

Neural and Evolutionary Computing · Computer Science 2022-02-22 Kameron Decker Harris

In this work, we introduce a Tropical Axial Attention neural reasoning architecture that replaces vanilla softmax dot-product attention with max-plus operators, inducing a piecewise-linear structure aligned with dynamic programming…

Populations and Evolution · Quantitative Biology 2026-05-15 Chris Teska , Kurt Pasque , Ruriko Yoshida , Baran Hashemi

We introduce a model for granular flow in a one-dimensional rice pile that incorporates rolling effects through a long-range rolling probability for the individual rice grains proportional to $r^{-\rho}$, $r$ being the distance traveled by…

Disordered Systems and Neural Networks · Physics 2009-10-31 Pablo M. Gleiser , Sergio A. Cannas , Francisco A. Tamarit , B. Zheng

Estimated connectomes by the means of neuroimaging techniques have enriched our knowledge of the organizational properties of the brain leading to the development of network-based clinical diagnostics. Unfortunately, to date, many of those…

Neurons and Cognition · Quantitative Biology 2018-05-31 Roseric Azondekon , Zachary James Harper , Charles Michael Welzig

Quantifying similarity between data objects is an important part of modern data science. Deciding what similarity measure to use is very application dependent. In this paper, we combine insights from systems theory and machine learning, and…

Systems and Control · Computer Science 2018-03-09 Oliver Lauwers , Bart De Moor

Neural networks, a central tool in machine learning, have demonstrated remarkable, high fidelity performance on image recognition and classification tasks. These successes evince an ability to accurately represent high dimensional…

Machine Learning · Statistics 2023-02-08 Grant M. Rotskoff , Eric Vanden-Eijnden

Grid cells, discovered more than a decade ago [5], are neurons in the brain of mammals that fire when the animal is located near certain specific points in its familiar terrain. Intriguingly, these points form, for a single cell, a…

Neurons and Cognition · Quantitative Biology 2016-06-16 Christos H. Papadimitriou

The Earth movers distance (EMD) is a measure of distance between probability distributions which is at the heart of mass transportation theory. Recent research has shown that the EMD plays a crucial role in studying the potential impact of…

Computation · Statistics 2013-10-15 Kyle Treleaven , Emilio Frazzoli

Distributional reinforcement learning (DRL) extends the value-based approach by approximating the full distribution over future returns instead of the mean only, providing a richer signal that leads to improved performances. Quantile…

Machine Learning · Statistics 2022-02-23 Alix Lhéritier , Nicolas Bondoux

This paper investigates discrete-time evolutionary games with a general stochastic imitation rule on the toroidal grid, which is a grid network with periodic boundary conditions. The imitation rule has been considered as a fundamental rule…

Optimization and Control · Mathematics 2023-06-30 Ge Chen , Yongyuan Yu