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Computational modeling of cancer can help unveil dynamics and interactions that are hard to replicate experimentally. Thanks to the advancement in cancer databases and data analysis technologies, these models have become more robust than…

Quantitative Methods · Quantitative Biology 2023-11-07 Navid Mohammad Mirzaei , Leili Shahriyari

The Quermass-interaction model allows to generalise the classical germ-grain Boolean model in adding a morphological interaction between the grains. It enables to model random structures with specific morphologies which are unlikely to be…

Statistics Theory · Mathematics 2014-05-30 David Dereudre , Frédéric Lavancier , Katerina Helisova Stankova

Predicting the response of a patient to a cancer treatment is of high interest. Nonetheless, this task is still challenging from a medical point of view due to the complexity of the interaction between the patient organism and the…

Computer Vision and Pattern Recognition · Computer Science 2024-08-09 Bilel Guetarni , Feryal Windal , Halim Benhabiles , Mahfoud Chaibi , Romain Dubois , Emmanuelle Leteurtre , Dominique Collard

In the study of cancer evolution and therapeutic strategies, scientific evidence shows that a key dynamics lies in the tumor-environment interaction. In particular, oxygen concentration plays a central role in the determination of the…

Populations and Evolution · Quantitative Biology 2023-07-20 Giulia Chiari , Giada Fiandaca , Marcello Edoardo Delitala

Central to the quest for a deeper understanding of the cancer growth and spread process, the naturally multiscale character of cancer invasion demands appropriate multiscale modelling and analysis approach. The cross-talk between the tissue…

Numerical Analysis · Mathematics 2018-05-22 Thomas Carraro , Sven E. Wetterauer , Ana Victoria Ponce Bobadilla , Dumitru Trucu

The cells and their spatial patterns in the tumor microenvironment (TME) play a key role in tumor evolution, and yet the latter remains an understudied topic in computational pathology. This study, to the best of our knowledge, is among the…

Quantitative Methods · Quantitative Biology 2021-09-21 Pingjun Chen , Muhammad Aminu , Siba El Hussein , Joseph D. Khoury , Jia Wu

We consider a mathematical model for the evolutionary dynamics of tumour cells in vascularised tumours under chemotherapy. The model comprises a system of coupled partial integro-differential equations for the phenotypic distribution of…

Tissues and Organs · Quantitative Biology 2020-06-02 Chiara Villa , Mark A. J. Chaplain , Tommaso Lorenzi

A tumor can be thought of as an ecosystem, which critically means that we cannot just consider it as a collection of mutated cells but more as a complex system of many interacting cellular and microenvironmental elements. At its simplest, a…

Populations and Evolution · Quantitative Biology 2013-05-03 Jill Gallaher , Alexander R. A. Anderson

Motivation: A branching processes model yields an unevenly stochastically distributed dataset that consists of sparse and dense regions. This work addresses the problem of precisely evaluating parameters for such a model. Applying a…

Machine Learning · Statistics 2023-05-09 Iurii S. Nagornov

Accurately predicting immunotherapy response in Non-Small Cell Lung Cancer (NSCLC) remains a critical unmet need. Existing radiomics and deep learning-based predictive models rely primarily on pre-treatment imaging to predict categorical…

Image and Video Processing · Electrical Eng. & Systems 2025-05-30 Moinak Bhattacharya , Judy Huang , Amna F. Sher , Gagandeep Singh , Chao Chen , Prateek Prasanna

Upcoming immunotherapies for cancer treatment rely on the ability of the immune system to detect and eliminate tumors in the body. A highly simplified version of this process can be studied in a Petri dish: starting with a random…

Quantitative Methods · Quantitative Biology 2019-07-25 Claus Metzner

Visual microscopic study of diseased tissue by pathologists has been the cornerstone for cancer diagnosis and prognostication for more than a century. Recently, deep learning methods have made significant advances in the analysis and…

Image and Video Processing · Electrical Eng. & Systems 2022-09-30 Puria Azadi Moghadam , Sanne Van Dalen , Karina C. Martin , Jochen Lennerz , Stephen Yip , Hossein Farahani , Ali Bashashati

We present a problem-suited numerical method for a particularly challenging cancer invasion model. This model is a multiscale haptotaxis advection-reaction-diffusion system that describes the macroscopic dynamics of two types of cancer…

Numerical Analysis · Mathematics 2016-05-18 Niklas Kolbe , Maria Lukacova-Medvidova , Nikolaos Sfakianakis , Bettina Wiebe

We propose a simple dynamic model of cancer development that captures carcinogenesis and subsequent cancer progression. A central idea of the model is to include the immune system as an extinction threshold, similar to the strong Allee…

Quantitative Methods · Quantitative Biology 2025-06-09 Frank Bastian , Hassan Alkhayuon , Kieran Mulchrone , Micheal O'Riordain , Sebastian Wieczorek

We report on a simple model of spatial extend anti-tumor system with a fluctuation in growth rate, which can undergo a nonequilibrium phase transition. Three states as excited, sub-excited and non-excited states of a tumor are defined to…

Biological Physics · Physics 2009-11-11 Wei-Rong Zhong , Yuan-Zhi Shao , Zhen-Hui He

Heterogeneity is a hallmark of all cancers. Tumor heterogeneity is found at different levels -- interpatient, intrapatient, and intratumor heterogeneity. All of them pose challenges for clinical treatments. The latter two scenarios can also…

Soft Condensed Matter · Physics 2020-04-03 Xin Li , D. Thirumalai

In the tumour microenvironment, cancer cells directly interact with both the immune system and the stroma. It is firmly established that the immune system, historically believed to be a major part of the body's defence against tumour…

Tissues and Organs · Quantitative Biology 2017-09-01 R J Seager , Cynthia Hajal , Fabian Spill , Roger D Kamm , Muhammad H Zaman

We present a multiphase mathematical model for tumor growth which incorporates the remodeling of the extracellular matrix and describes the formation of fibrotic tissue by tumor cells. We also detail a full qualitative analysis of the…

Mathematical Physics · Physics 2010-08-09 Andrea Tosin , Luigi Preziosi

Phenotype variations define heterogeneity of biological and molecular systems, which play a crucial role in several mechanisms. Heterogeneity has been demonstrated in tumor cells. Here, samples from blood of patients affected from colon…

Biological Physics · Physics 2015-11-09 Giuseppina Simone

We formulate the dynamical model for the anti-tumor immune response based on intercellular cytokine-mediated interactions with the interleukin-2 (IL-2) taken into account. The analysis shows that the expression level of tumor antigens on…

Cell Behavior · Quantitative Biology 2008-07-26 O. G. Isaeva , V. A. Osipov
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