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Integrating heterogeneous biomedical data including imaging, omics, and clinical records supports accurate diagnosis and personalised care. Graph-based models fuse such non-Euclidean data by capturing spatial and relational structure, yet…

Genomics · Quantitative Biology 2025-05-06 Alireza Sadeghi , Farshid Hajati , Ahmadreza Argha , Nigel H Lovell , Min Yang , Hamid Alinejad-Rokny

We propose a new method to create compact convolutional neural networks (CNNs) by exploiting sparse convolutions. Different from previous works that learn sparsity in models, we directly employ hand-crafted kernels with regular sparse…

Computer Vision and Pattern Recognition · Computer Science 2018-09-12 Chun-Fu Chen , Quanfu Fan , Marco Pistoia , Gwo Giun Lee

Spiking Neural Networks (SNNs) provide an efficient computational mechanism for temporal signal processing, especially when coupled with low-power SNN inference ASICs. SNNs have been historically difficult to configure, lacking a general…

Neural and Evolutionary Computing · Computer Science 2022-09-21 Hannah Bos , Dylan Muir

Training a deep neural network requires a large amount of single-task data and involves a long time-consuming optimization phase. This is not scalable to complex, realistic environments with new unexpected changes. Humans can perform fast…

Neural and Evolutionary Computing · Computer Science 2020-09-04 Tsendsuren Munkhdalai

Efficient and interpretable spatial analysis is crucial in many fields such as geology, sports, and climate science. Tensor latent factor models can describe higher-order correlations for spatial data. However, they are computationally…

Machine Learning · Computer Science 2020-08-18 Jung Yeon Park , Kenneth Theo Carr , Stephan Zheng , Yisong Yue , Rose Yu

Sparse Tensor Cores offer exceptional performance gains for AI workloads by exploiting structured 2:4 sparsity. However, their potential remains untapped for core scientific workloads such as stencil computations, which exhibit irregular…

Computational Engineering, Finance, and Science · Computer Science 2025-07-01 Qi Li , Kun Li , Haozhi Han , Liang Yuan , Junshi Chen , Yunquan Zhang , Yifeng Chen , Hong An , Ting Cao , Mao Yang

Spiking Neural Networks (SNNs) are distributed trainable systems whose computing elements, or neurons, are characterized by internal analog dynamics and by digital and sparse synaptic communications. The sparsity of the synaptic spiking…

Signal Processing · Electrical Eng. & Systems 2019-10-22 Hyeryung Jang , Osvaldo Simeone , Brian Gardner , André Grüning

There has been significant research over the past two decades in developing new platforms for spiking neural computation. Current neural computers are primarily developed to mimick biology. They use neural networks which can be trained to…

Neural and Evolutionary Computing · Computer Science 2015-07-23 Xavier Lagorce , Ryad Benosman

Modern artificial intelligence has revolutionized our ability to extract rich and versatile data representations across scientific disciplines. Yet, the statistical properties of these representations remain poorly controlled, causing…

Machine Learning · Computer Science 2025-11-06 Gaia Grosso , Sai Sumedh R. Hindupur , Thomas Fel , Samuel Bright-Thonney , Philip Harris , Demba Ba

The ability to interpret machine learning model decisions is critical in such domains as healthcare, where trust in model predictions is as important as their accuracy. Inspired by the development of prototype parts-based deep neural…

Machine Learning · Computer Science 2026-03-06 Jacek Karolczak , Jerzy Stefanowski

Deep kernel learning provides an elegant and principled framework for combining the structural properties of deep learning algorithms with the flexibility of kernel methods. By means of a deep neural network, we learn a parametrized kernel…

Machine Learning · Computer Science 2020-12-14 Prudencio Tossou , Basile Dura , Francois Laviolette , Mario Marchand , Alexandre Lacoste

Microscopy techniques have played vital roles in materials science, biology, and nanotechnology, offering high-resolution imaging and detailed insights into properties at nanoscale and atomic level. The automation of microscopy experiments,…

Materials Science · Physics 2024-08-06 Utkarsh Pratiush , Hiroshi Funakubo , Rama Vasudevan , Sergei V. Kalinin , Yongtao Liu

The application of Gaussian processes (GPs) to large data sets is limited due to heavy memory and computational requirements. A variety of methods has been proposed to enable scalability, one of which is to exploit structure in the kernel…

Machine Learning · Computer Science 2019-12-30 Jan Graßhoff , Alexandra Jankowski , Philipp Rostalski

Kernel methods provide a theoretically grounded framework for non-linear and non-parametric learning, with strong analytic foundations and statistical guarantees. Yet, their scalability has long been limited by prohibitive time and memory…

Machine Learning · Computer Science 2025-10-01 Maedeh Zarvandi , Michael Timothy , Theresa Wasserer , Debarghya Ghoshdastidar

Sparse matrix-vector and matrix-matrix multiplication (SpMV and SpMM) are fundamental in both conventional (graph analytics, scientific computing) and emerging (sparse DNN, GNN) domains. Workload-balancing and parallel-reduction are…

Distributed, Parallel, and Cluster Computing · Computer Science 2021-10-15 Guyue Huang , Guohao Dai , Yu Wang , Yufei Ding , Yuan Xie

The majority of research in both training Artificial Neural Networks (ANNs) and modeling learning in biological brains focuses on synaptic plasticity, where learning equates to changing the strength of existing connections. However, in…

Neural and Evolutionary Computing · Computer Science 2026-03-13 James C. Knight , Johanna Senk , Thomas Nowotny

We introduce Matched Machine Learning, a framework that combines the flexibility of machine learning black boxes with the interpretability of matching, a longstanding tool in observational causal inference. Interpretability is paramount in…

Methodology · Statistics 2023-04-05 Marco Morucci , Cynthia Rudin , Alexander Volfovsky

We present the performance of a semantic segmentation network, SparseSSNet, that provides pixel-level classification of MicroBooNE data. The MicroBooNE experiment employs a liquid argon time projection chamber for the study of neutrino…

Instrumentation and Detectors · Physics 2021-04-07 MicroBooNE collaboration , P. Abratenko , M. Alrashed , R. An , J. Anthony , J. Asaadi , A. Ashkenazi , S. Balasubramanian , B. Baller , C. Barnes , G. Barr , V. Basque , L. Bathe-Peters , O. Benevides Rodrigues , S. Berkman , A. Bhanderi , A. Bhat , M. Bishai , A. Blake , T. Bolton , L. Camilleri , D. Caratelli , I. Caro Terrazas , R. Castillo Fernandez , F. Cavanna , G. Cerati , Y. Chen , E. Church , D. Cianci , J. M. Conrad , M. Convery , L. Cooper-Troendle , J. I. Crespo-Anadon , M. Del Tutto , S. R. Dennis , D. Devitt , R. Diurba , R. Dorrill , K. Duffy , S. Dytman , B. Eberly , A. Ereditato , J. J. Evans , G. A. Fiorentini Aguirre , R. S. Fitzpatrick , B. T. Fleming , N. Foppiani , D. Franco , A. P. Furmanski , D. Garcia-Gamez , S. Gardiner , G. Ge , S. Gollapinni , O. Goodwin , E. Gramellini , P. Green , H. Greenlee , W. Gu , R. Guenette , P. Guzowski , L. Hagaman , E. Hall , P. Hamilton , O. Hen , G. A. Horton-Smith , A. Hourlier , R. Itay , C. James , J. Jan de Vries , X. Ji , L. Jiang , J. H. Jo , R. A. Johnson , Y. J. Jwa , N. Kamp , N. Kaneshige , G. Karagiorgi , W. Ketchum , B. Kirby , M. Kirby , T. Kobilarcik , I. Kreslo , R. LaZur , I. Lepetic , K. Li , Y. Li , B. R. Littlejohn , W. C. Louis , X. Luo , A. Marchionni , C. Mariani , D. Marsden , J. Marshall , J. Martin-Albo , D. A. Martinez Caicedo , K. Mason , A. Mastbaum , N. McConkey , V. Meddage , T. Mettler , K. Miller , J. Mills , K. Mistry , T. Mohayai , A. Mogan , J. Moon , M. Mooney , A. F. Moor , C. D. Moore , L. Mora Lepin , J. Mousseau , M. Murphy , D. Naples , A. Navrer-Agasson , R. K. Neely , P. Nienaber , J. Nowak , O. Palamara , V. Paolone , A. Papadopoulou , V. Papavassiliou , S. F. Pate , A. Paudel , Z. Pavlovic , E. Piasetzky , I. Ponce-Pinto , S. Prince , X. Qian , J. L. Raaf , V. Radeka , A. Rafique , M. Reggiani-Guzzo , L. Ren , L. Rochester , J. Rodriguez Rondon , H. E. Rogers , M. Rosenberg , M. Ross-Lonergan , B. Russell , G. Scanavini , D. W. Schmitz , A. Schukraft , W. Seligman , M. H. Shaevitz , R. Sharankova , J. Sinclair , A. Smith , E. L. Snider , M. Soderberg , S. Soldner-Rembold , S. R. Soleti , P. Spentzouris , J. Spitz , M. Stancari , J. St. John , T. Strauss , K. Sutton , S. Sword-Fehlberg , A. M. Szelc , N. Tagg , W. Tang , K. Terao , C. Thorpe , M. Toups , Y. -T. Tsai , M. A. Uchida , T. Usher , W. Van De Pontseele , B. Viren , M. Weber , H. Wei , Z. Williams , S. Wolbers , T. Wongjirad , M. Wospakrik , W. Wu , E. Yandel , T. Yang , G. Yarbrough , L. E. Yates , G. P. Zeller , J. Zennamo , C. Zhang

Recent developments in single-cell omics technologies have enabled the quantification of molecular profiles in individual cells at an unparalleled resolution. Deep learning, a rapidly evolving sub-field of machine learning, has instilled a…

Genomics · Quantitative Biology 2024-01-17 Manoj M Wagle , Siqu Long , Carissa Chen , Chunlei Liu , Pengyi Yang

We propose learning flexible but interpretable functions that aggregate a variable-length set of permutation-invariant feature vectors to predict a label. We use a deep lattice network model so we can architect the model structure to…

Machine Learning · Computer Science 2018-06-04 Andrew Cotter , Maya Gupta , Heinrich Jiang , James Muller , Taman Narayan , Serena Wang , Tao Zhu