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A tree $\sigma$-spanner of a positively real-weighted $n$-vertex and $m$-edge undirected graph $G$ is a spanning tree $T$ of $G$ which approximately preserves (i.e., up to a multiplicative stretch factor $\sigma$) distances in $G$. Tree…
The linear-size suffix tries (LSTries) [Crochemore et al., TCS 2016] are a version of suffix trees in which the edge labels are single characters, yet are able to perform pattern matching queries in optimal time. Instead of explicitly…
Recently Kubica et al. (Inf. Process. Let., 2013) and Kim et al. (submitted to Theor. Comp. Sci.) introduced order-preserving pattern matching. In this problem we are looking for consecutive substrings of the text that have the same "shape"…
Suffix trees are key and efficient data structure for solving string problems. A suffix tree is a compressed trie containing all the suffixes of a given text of length $n$ with a linear construction cost. In this work, we introduce an…
Text indexing is a classical algorithmic problem that has been studied for over four decades: given a text $T$, pre-process it off-line so that, later, we can quickly count and locate the occurrences of any string (the query pattern) in $T$…
Each time-series has its own linear trend, the directionality of a timeseries, and removing the linear trend is crucial to get the more intuitive matching results. Supporting the linear detrending in subsequence matching is a challenging…
Detecting all the strings that occur in a text more frequently or less frequently than expected according to an IID or a Markov model is a basic problem in string mining, yet current algorithms are based on data structures that are either…
In a temporal forest each edge has an associated set of time labels that specify the time instants in which the edges are available. A temporal path from vertex $u$ to vertex $v$ in the forest is a selection of a label for each edge in the…
The leafage of a chordal graph G is the minimum integer l such that G can be realized as an intersection graph of subtrees of a tree with l leaves. We consider structural parameterization by the leafage of classical domination and cut…
A string is said to be closed if its length is one, or if it has a non-empty factor that occurs both as a prefix and as a suffix of the string, but does not occur elsewhere. The notion of closed words was introduced by [Fici, WORDS 2011].…
For any forest $G = (V, E)$ it is possible to orient the edges $E$ so that no vertex in $V$ has out-degree greater than $1$. This paper considers the incremental edge-orientation problem, in which the edges $E$ arrive over time and the…
Graph streams represent data interactions in real applications. The mining of graph streams plays an important role in network security, social network analysis, and traffic control, among others. However, the sheer volume and high dynamics…
Spanning trees of low average stretch on the non-tree edges, as introduced by Alon et al. [SICOMP 1995], are a natural graph-theoretic object. In recent years, they have found significant applications in solvers for symmetric diagonally…
The palindromic tree (a.k.a. eertree) for a string $S$ of length $n$ is a tree-like data structure that represents the set of all distinct palindromic substrings of $S$, using $O(n)$ space [Rubinchik and Shur, 2018]. It is known that, when…
We study the problem of matching a string in a labeled graph. Previous research has shown that unless the Orthogonal Vectors Hypothesis (OVH) is false, one cannot solve this problem in strongly sub-quadratic time, nor index the graph in…
A temporal graph is a graph whose edges appear at certain points in time. These graphs are temporally connected (in class TC) if all vertices can reach each other by temporal paths (traversing the edges in chronological order). Reachability…
Low-latency sliding window algorithms for regular and context-free languages are studied, where latency refers to the worst-case time spent for a single window update or query. For every regular language $L$ it is shown that there exists a…
Suffix trees are an important data structure at the core of optimal solutions to many fundamental string problems, such as exact pattern matching, longest common substring, matching statistics, and longest repeated substring. Recent lines…
Finding the shortest-path distance between two arbitrary vertices is an important problem in road networks. Due to real-time traffic conditions, road networks undergo dynamic changes all the time. Current state-of-the-art methods…
A routing labeling scheme assigns a binary string, called a label, to each node in a network, and chooses a distinct port number from $\{1,\ldots,d\}$ for every edge outgoing from a node of degree $d$. Then, given the labels of $u$ and $w$…