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In this study, we have developed a parallel version of the random time simulation algorithm. Firstly, we gave a rigorous basis of the random time description of the stochastic process of chemical reaction network time evolution. And then we…

Molecular Networks · Quantitative Biology 2021-03-02 Chuanbo Liu , Jin Wang

A multiverse analysis evaluates all combinations of "reasonable" analytic decisions to promote robustness and transparency, but can lead to a combinatorial explosion of analyses to compute. Long delays before assessing results prevent users…

Human-Computer Interaction · Computer Science 2023-05-16 Yang Liu , Tim Althoff , Jeffrey Heer

We present an extension of local sensitivity analysis, also referred to as the perturbation approach for uncertainty quantification, to Bayesian inverse problems. More precisely, we show how moments of random variables with respect to the…

Numerical Analysis · Mathematics 2026-04-06 Jürgen Dölz , David Ebert

Gradient descent, and coordinate descent in particular, are core tools in machine learning and elsewhere. Large problem instances are common. To help solve them, two orthogonal approaches are known: acceleration and parallelism. In this…

Optimization and Control · Mathematics 2018-08-16 Richard Cole , Yixin Tao

The present paper deals with the problem of improving the efficiency of large scale turbulent flow simulations. The high-fidelity methods for modelling turbulent flows become available for a wider range of applications thanks to the…

Computational Physics · Physics 2018-04-10 Boris Krasnopolsky

Recent years have witnessed the surge of asynchronous parallel (async-parallel) iterative algorithms due to problems involving very large-scale data and a large number of decision variables. Because of asynchrony, the iterates are computed…

Optimization and Control · Mathematics 2021-02-05 Zhimin Peng , Yangyang Xu , Ming Yan , Wotao Yin

Solving flow-related inverse problems such as topology optimization problems is intricate but significant in various engineering fields. The lattice Boltzmann method (LBM) and the related adjoint method are highly suitable to perform…

Numerical Analysis · Mathematics 2025-06-10 Ji-Wang Luo , Li Chen , Kentaro Yaji , Wen-Quan Tao

This work reports an approach to study complementary pairs of bipolar junction transistors, often used in push-pull circuits typically found at the output stages of operational amplifiers. After the data is acquired and pre-processed, an…

Applied Physics · Physics 2018-01-23 Luciano da F. Costa

This paper presents a non-intrusive framework for integrating existing unsteady partial differential equation (PDE) solvers into a parallel-in-time simultaneous optimization algorithm. The time-parallelization is provided by the…

Optimization and Control · Mathematics 2018-03-01 Stefanie Günther , Nicolas R. Gauger , Jacob B. Schroder

The Parareal algorithm allows to solve evolution problems exploiting parallelization in time. Its convergence and stability have been proved under the assumption of regular (smooth) inputs. We present and analyze here a new Parareal…

Numerical Analysis · Mathematics 2019-04-09 Martin J. Gander , Iryna Kulchytska-Ruchka , Innocent Niyonzima , Sebastian Schöps

Parallel stochastic gradient methods are gaining prominence in solving large-scale machine learning problems that involve data distributed across multiple nodes. However, obtaining unbiased stochastic gradients, which have been the focus of…

Machine Learning · Computer Science 2025-01-14 Ali Beikmohammadi , Sarit Khirirat , Sindri Magnússon

The most efficient way to calculate strong bisimilarity is by calculation the relational coarsest partition on a transition system. We provide the first linear time algorithm to calculate strong bisimulation using parallel random access…

Distributed, Parallel, and Cluster Computing · Computer Science 2021-05-26 Jan Martens , Jan Friso Groote , Lars van den Haak , Pieter Hijma , Anton Wijs

This article introduces a novel Bayesian method for asynchronous change-point detection in multivariate time series. This method allows for change-points to occur earlier in some (leading) series followed, after a short delay, by…

Methodology · Statistics 2025-08-28 Carson McKee , Maria Kalli

Random instances of feedforward Boolean circuits are studied both analytically and numerically. Evaluating these circuits is known to be a P-complete problem and thus, in the worst case, believed to be impossible to perform, even given a…

Disordered Systems and Neural Networks · Physics 2011-07-25 Jon Machta , Simon DeDeo , Stephan Mertens , Cristopher Moore

Asynchronous Bayesian optimization is a recently implemented technique that allows for parallel operation of experimental systems and disjointed workflows. Contrasting with serial Bayesian optimization which individually selects experiments…

Machine Learning · Computer Science 2024-10-23 Amanda A. Volk , Kristofer G. Reyes , Jeffrey G. Ethier , Luke A. Baldwin

This Technical Note outlines an adjoint complement to a critical building block of pressure-based Finite-Volume (FV) flow solvers that employ a collocated variable arrangement to simulate virtually incompressible fluids. The focal point is…

Numerical Analysis · Mathematics 2022-08-10 Niklas Kühl , Thomas Rung

Recent several years have witnessed the surge of asynchronous (async-) parallel computing methods due to the extremely big data involved in many modern applications and also the advancement of multi-core machines and computer clusters. In…

Optimization and Control · Mathematics 2019-10-17 Yangyang Xu

We consider the inverse problem of estimating the spatially varying pulse wave velocity in blood vessels in the brain from dynamic MRI data, as it appears in the recently proposed imaging technique of Magnetic Resonance Advection Imaging…

Numerical Analysis · Mathematics 2020-01-13 Simon Hubmer , Andreas Neubauer , Ronny Ramlau , Henning U. Voss

The algorithm based on integration over Lefschetz thimbles is a promising method to resolve the sign problem for complex actions. However, this algorithm often meets a difficulty in actual Monte Carlo calculations because the configuration…

High Energy Physics - Lattice · Physics 2019-12-06 Masafumi Fukuma , Naoya Umeda

For a nonlinear system (e.g. a robot) with its continuous state space trajectories constrained by a linear temporal logic specification, the synthesis of a low-level controller for mission execution often results in a non-convex…

Robotics · Computer Science 2020-09-08 Binghan He , Jaemin Lee , Ufuk Topcu , Luis Sentis