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Proteins are essential components of living systems, capable of performing a huge variety of tasks at the molecular level, such as recognition, signalling, copy, transport, ... The protein sequences realizing a given function may largely…

Biomolecules · Quantitative Biology 2016-02-17 John Barton , Arup Chakraborty , Simona Cocco , Hugo Jacquin , Rémi Monasson

In this sequel to "Foundations of matroids - Part 1", we establish several presentations of the foundation of a matroid in terms of small building blocks. For example, we show that the foundation of a matroid M is the colimit of the…

Combinatorics · Mathematics 2024-07-31 Matthew Baker , Oliver Lorscheid , Tianyi Zhang

We use complex contour integral techniques to study the entropy H and subentropy Q as functions of the elementary symmetric polynomials, revealing a series of striking properties. In particular for these variables, derivatives of -Q are…

Quantum Physics · Physics 2013-10-25 Richard Jozsa , Graeme Mitchison

The paper describes ergodic (with respect to the Haar measure) functions in the class of all functions, which are defined on (and take values in) the ring of p-adic integers, and which satisfy (at least, locally) Lipschitz condition with…

Number Theory · Mathematics 2007-07-16 Vladimir Anashin

We introduce a connectivity function for infinite matroids with properties similar to the connectivity function of a finite matroid, such as submodularity and invariance under duality. As an application we use it to extend Tutte's linking…

Combinatorics · Mathematics 2011-01-31 Henning Bruhn , Paul Wollan

We investigate partially observed Markov decision processes (POMDPs) with cost functions regularized by entropy terms describing state, observation, and control uncertainty. Standard POMDP techniques are shown to offer bounded-error…

Systems and Control · Electrical Eng. & Systems 2023-05-10 Timothy L. Molloy , Girish N. Nair

In this paper, we firstly give the definition of meromorphic function element and algebroid mapping. We also construct the algebroid function family in which the arithmetic, differential operations is closed. On basis of these works, we…

Complex Variables · Mathematics 2009-12-15 Daochun Sun , Zongsheng Gao , Huifang Liu

We consider the following Stochastic Boolean Function Evaluation problem, which is closely related to several problems from the literature. A matroid $\mathcal{M}$ (in compact representation) on ground set $E$ is given, and each element…

Data Structures and Algorithms · Computer Science 2026-01-13 Lisa Hellerstein , Benedikt M. Plank , Kevin Schewior

In this paper we study the coefficients of the powers of an ordinary generating function and their properties. A new class of functions based on compositions of an integer $n$ is introduced and is termed composita. We present theorems about…

Combinatorics · Mathematics 2013-03-26 Vladimir V. Kruchinin , Dmitry V. Kruchinin

We consider a system model of a general finite-state machine (ratchet) that simultaneously interacts with three kinds of reservoirs: a heat reservoir, a work reservoir, and an information reservoir, the latter being taken to be a running…

Statistical Mechanics · Physics 2017-03-08 Neri Merhav

This paper introduces a framework for modeling cyclical and feedback-driven information flow through a generalized family of entropy-modulated transformations called derangetropy functionals. Unlike scalar and static entropy measures such…

Information Theory · Computer Science 2025-06-17 Masoud Ataei , Xiaogang Wang

Matrix Product Operators (MPOs) are at the heart of the second-generation Density Matrix Renormalisation Group (DMRG) algorithm formulated in Matrix Product State language. We first summarise the widely known facts on MPO arithmetic and…

Strongly Correlated Electrons · Physics 2017-01-20 C. Hubig , I. P. McCulloch , U. Schollwöck

The matrix-based Renyi's \alpha-order entropy functional was recently introduced using the normalized eigenspectrum of a Hermitian matrix of the projected data in a reproducing kernel Hilbert space (RKHS). However, the current theory in the…

Information Theory · Computer Science 2019-08-01 Shujian Yu , Luis Gonzalo Sanchez Giraldo , Robert Jenssen , Jose C. Principe

We study geometric properties of trace functionals that generalize those in [Zhang, Adv. Math. 365:107053 (2020)], arising from a novel family of conditional entropies with applications in quantum information. Building on new convexity…

Quantum Physics · Physics 2026-03-17 Roberto Rubboli , Milad M. Goodarzi , Marco Tomamichel

We consider three forms of composition of matroids, each of which extends the category of bimatroids to a rigid monoidal category. Many well-known constructions are functorial or defined by morphisms in these categories. Motivating examples…

Combinatorics · Mathematics 2024-03-07 Kevin Purbhoo

Efficient deterministic algorithms to construct representations of lattice path matroids over finite fields are presented. They are built on known constructions of hierarchical secret sharing schemes, a recent characterization of…

Combinatorics · Mathematics 2024-07-09 Carles Padró

We provide a constructive characterisation of circuits in the simple (2,2)-sparsity matroid. A circuit is a simple graph G=(V,E) with |E|=2|V|-1 and the number of edges induced by any $X \subsetneq V$ is at most 2|X|-2. Insisting on…

Combinatorics · Mathematics 2013-06-24 Anthony Nixon

The translated logarithmic Lambert function is defined and basic analytic properties of the function are obtained including the derivative, integral, Taylor series expansion, real branches and asymptotic approximation of the function.…

Combinatorics · Mathematics 2021-03-26 Cristina B. Corcino , Roberto B. Corcino

A positroid is a matroid realized by a matrix such that all maximal minors are non-negative. Positroid polytopes are matroid polytopes of positroids. In particular, they are lattice polytopes. The Ehrhart polynomial of a lattice polytope…

Combinatorics · Mathematics 2025-01-20 Yuhan Jiang

We shall show that a two-parameter extended entropy function is characterized by a functional equation. As a corollary of this result, we obtain that the Tsallis entropy function is characterized by a functional equation, which is a…

Information Theory · Computer Science 2010-05-20 Shigeru Furuichi
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