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Over the last decade, electron microscopy has improved up to a point that generating high quality gigavoxel sized datasets only requires a few hours. Automated image analysis, particularly image segmentation, however, has not evolved at the…

Computer Vision and Pattern Recognition · Computer Science 2019-11-14 Joris Roels , Yvan Saeys

Supervised learning algorithms based on Convolutional Neural Networks have become the benchmark for medical image segmentation tasks, but their effectiveness heavily relies on a large amount of labeled data. However, annotating medical…

Image and Video Processing · Electrical Eng. & Systems 2023-11-20 Tao Wang , Yuanbin Chen , Xinlin Zhang , Yuanbo Zhou , Junlin Lan , Bizhe Bai , Tao Tan , Min Du , Qinquan Gao , Tong Tong

Accurate segmentation for medical images is important for clinical diagnosis. Existing automatic segmentation methods are mainly based on fully supervised learning and have an extremely high demand for precise annotations, which are very…

Computer Vision and Pattern Recognition · Computer Science 2021-06-10 Yuanpeng Liu , Qinglei Hui , Zhiyi Peng , Shaolin Gong , Dexing Kong

Medical image segmentation is critical for computer-aided diagnosis. However, dense pixel-level annotation is time-consuming and expensive, and medical datasets often exhibit severe class imbalance. Such imbalance causes minority structures…

Computer Vision and Pattern Recognition · Computer Science 2026-03-06 Yingxue Su , Yiheng Zhong , Keying Zhu , Zimu Zhang , Zhuoru Zhang , Yifang Wang , Yuxin Zhang , Jingxin Liu

Despite that deep learning has achieved state-of-the-art performance for medical image segmentation, its success relies on a large set of manually annotated images for training that are expensive to acquire. In this paper, we propose an…

Image and Video Processing · Electrical Eng. & Systems 2021-01-01 Lu Wang , Dong Guo , Guotai Wang , Shaoting Zhang

Active learning (AL) strategies aim to train high-performance models with minimal labeling efforts, only selecting the most informative instances for annotation. Current approaches to evaluating data informativeness predominantly focus on…

Computer Vision and Pattern Recognition · Computer Science 2026-01-23 Zhixuan Liang , Xingyu Zeng , Rui Zhao , Ping Luo

Surgical tool segmentation in endoscopic images is an important problem: it is a crucial step towards full instrument pose estimation and it is used for integration of pre- and intra-operative images into the endoscopic view. While many…

Computer Vision and Pattern Recognition · Computer Science 2020-07-10 Daniil Pakhomov , Wei Shen , Nassir Navab

Automatic medical image segmentation plays a critical role in scientific research and medical care. Existing high-performance deep learning methods typically rely on large training datasets with high-quality manual annotations, which are…

Image and Video Processing · Electrical Eng. & Systems 2021-11-17 Shanshan Wang , Cheng Li , Rongpin Wang , Zaiyi Liu , Meiyun Wang , Hongna Tan , Yaping Wu , Xinfeng Liu , Hui Sun , Rui Yang , Xin Liu , Jie Chen , Huihui Zhou , Ismail Ben Ayed , Hairong Zheng

Deep learning (DL) algorithms rely on massive amounts of labeled data. Semi-supervised learning (SSL) and active learning (AL) aim to reduce this label complexity by leveraging unlabeled data or carefully acquiring labels, respectively. In…

Machine Learning · Computer Science 2023-02-16 Seo Taek Kong , Soomin Jeon , Dongbin Na , Jaewon Lee , Hong-Seok Lee , Kyu-Hwan Jung

Deep learning-based medical image segmentation typically requires large amount of labeled data for training, making it less applicable in clinical settings due to high annotation cost. Semi-supervised learning (SSL) has emerged as an…

Image and Video Processing · Electrical Eng. & Systems 2025-03-03 Yichi Zhang , Bohao Lv , Le Xue , Wenbo Zhang , Yuchen Liu , Yu Fu , Yuan Cheng , Yuan Qi

A major problem with Active Learning (AL) is high training costs since models are typically retrained from scratch after every query round. We start by demonstrating that standard AL on neural networks with warm starting fails, both to…

Machine Learning · Computer Science 2023-12-14 Arnav Das , Gantavya Bhatt , Megh Bhalerao , Vianne Gao , Rui Yang , Jeff Bilmes

Analyzing CT scans, MRIs and X-rays is pivotal in diagnosing and treating diseases. However, detecting and identifying abnormalities from such medical images is a time-intensive process that requires expert analysis and is prone to…

Image and Video Processing · Electrical Eng. & Systems 2025-03-14 Daniel Syomichev , Padmini Gopinath , Guang-Lin Wei , Eric Chang , Ian Gordon , Amanuel Seifu , Rahul Pemmaraju , Neehar Peri , James Purtilo

Brain MR image segmentation is a key task in neuroimaging studies. It is commonly conducted using standard computational tools, such as FSL, SPM, multi-atlas segmentation etc, which are often registration-based and suffer from expensive…

Image and Video Processing · Electrical Eng. & Systems 2019-08-29 Chengliang Dai , Yuanhan Mo , Elsa Angelini , Yike Guo , Wenjia Bai

Active learning (AL) has emerged as a crucial strategy for reducing the prohibitive costs associated with medical image segmentation. However, standard uncertainty-based AL methods typically focus on maximizing performance metrics, ignoring…

Computer Vision and Pattern Recognition · Computer Science 2026-05-05 Ghazal Danaee , Mélanie Gaillochet , Christian Desrosiers , Herve Lombaert , Sylvain Bouix

One of the biggest challenges that complicates applied supervised machine learning is the need for huge amounts of labeled data. Active Learning (AL) is a well-known standard method for efficiently obtaining labeled data by first labeling…

Machine Learning · Computer Science 2021-08-18 Julius Gonsior , Maik Thiele , Wolfgang Lehner

Active Learning (AL) aims to reduce the labeling burden by interactively selecting the most informative samples from a pool of unlabeled data. While there has been extensive research on improving AL query methods in recent years, some…

Computer Vision and Pattern Recognition · Computer Science 2023-11-06 Carsten T. Lüth , Till J. Bungert , Lukas Klein , Paul F. Jaeger

We propose LiDAL, a novel active learning method for 3D LiDAR semantic segmentation by exploiting inter-frame uncertainty among LiDAR frames. Our core idea is that a well-trained model should generate robust results irrespective of…

Computer Vision and Pattern Recognition · Computer Science 2022-11-14 Zeyu Hu , Xuyang Bai , Runze Zhang , Xin Wang , Guangyuan Sun , Hongbo Fu , Chiew-Lan Tai

Segmentation of anatomical structures is a fundamental image analysis task for many applications in the medical field. Deep learning methods have been shown to perform well, but for this purpose large numbers of manual annotations are…

Computer Vision and Pattern Recognition · Computer Science 2019-12-24 Firat Ozdemir , Zixuan Peng , Philipp Fuernstahl , Christine Tanner , Orcun Goksel

Which volume to annotate next is a challenging problem in building medical imaging datasets for deep learning. One of the promising methods to approach this question is active learning (AL). However, AL has been a hard nut to crack in terms…

Computer Vision and Pattern Recognition · Computer Science 2022-09-15 Vishwesh Nath , Dong Yang , Holger R. Roth , Daguang Xu

Instance segmentation in 3D images is a fundamental task in biomedical image analysis. While deep learning models often work well for 2D instance segmentation, 3D instance segmentation still faces critical challenges, such as insufficient…

Computer Vision and Pattern Recognition · Computer Science 2018-07-02 Zhuo Zhao , Lin Yang , Hao Zheng , Ian H. Guldner , Siyuan Zhang , Danny Z. Chen