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Epidemics are emergent phenomena depending on the epidemiological characteristics of pathogens and the interaction and movement of people. Public transit systems have provided much important information about the movement of people, but…

Social and Information Networks · Computer Science 2018-09-24 Zhanwei Du , Chao Gao , Yuan Bai , Yongjian Yang , Petter Holme

Understanding the dynamics of the spread of diseases within populations is critical for effective public health interventions. We extend the classical SIR model by incorporating additional complexities such as the introduction of a cure and…

Populations and Evolution · Quantitative Biology 2025-10-30 Daniel Perkins , Davis Hunter , Drake Brown , Trevor Garrity , Wyatt Pochman

Graph-structured data and their related algorithms have attracted significant attention in many fields, such as influenza prediction in public health. However, the variable influenza seasonality, occasional pandemics, and domain knowledge…

Artificial Intelligence · Computer Science 2021-02-17 Jie Zhang , Pengfei Zhou , Hongyan Wu

Our chances to halt epidemic outbreaks rely on how accurately we represent the population structure underlying the disease spread. When analyzing global epidemics this force us to consider metapopulation models taking into account intra-…

Populations and Evolution · Quantitative Biology 2007-12-10 Alexei Vazquez

Among the realistic ingredients to be considered in the computational modeling of infectious diseases, human mobility represents a crucial challenge both on the theoretical side and in view of the limited availability of empirical data. In…

Physics and Society · Physics 2010-02-04 Duygu Balcan , Vittoria Colizza , Bruno Goncalves , Hao Hu , Jose J. Ramasco , Alessandro Vespignani

In this paper, we resort to the graph neural network (GNN) and propose the new channel tracking method for the massive multiple-input multiple-output networks under the high mobility scenario. We first utilize a small number of pilots to…

Information Theory · Computer Science 2020-04-21 Yindi Yang , Shun Zhang , Feifei Gao , Jianpeng Ma , Octavia A. Dobre

Location data collected from mobile devices represent mobility behaviors at individual and societal levels. These data have important applications ranging from transportation planning to epidemic modeling. However, issues must be overcome…

Machine Learning · Computer Science 2022-01-05 Alex Berke , Ronan Doorley , Kent Larson , Esteban Moro

Graphs have often been used to answer questions about the interaction between real-world entities by taking advantage of their capacity to represent complex topologies. Complex networks are known to be graphs that capture such non-trivial…

Machine Learning · Computer Science 2022-06-03 Gabriel Spadon , Jose F. Rodrigues-Jr

Graph Neural Networks (GNNs) have attracted increasing attention in recent years and have achieved excellent performance in semi-supervised node classification tasks. The success of most GNNs relies on one fundamental assumption, i.e., the…

Machine Learning · Computer Science 2024-12-03 Junchao Lin , Yuan Wan , Jingwen Xu , Xingchen Qi

We propose a novel Graph Neural Network (GNN) model, named DeepStateGNN, for analyzing traffic data, demonstrating its efficacy in two critical tasks: forecasting and reconstruction. Unlike typical GNN methods that treat each traffic sensor…

Machine Learning · Computer Science 2025-02-21 Yannick Wölker , Arash Hajisafi , Cyrus Shahabi , Matthias Renz

Learning representations for graphs plays a critical role in a wide spectrum of downstream applications. In this paper, we summarize the limitations of the prior works in three folds: representation space, modeling dynamics and modeling…

Machine Learning · Computer Science 2021-04-07 Li Sun , Zhongbao Zhang , Jiawei Zhang , Feiyang Wang , Hao Peng , Sen Su , Philip S. Yu

We study metapopulation models for the spread of epidemics in which different subpopulations (cities) are connected by fluxes of individuals (travelers). This framework allows to describe the spread of a disease on a large scale and we…

Populations and Evolution · Quantitative Biology 2008-03-20 Aurelien Gautreau , Alain Barrat , Marc Barthelemy

This study proposes a hybrid deep-learning-metaheuristic framework with a bi-level architecture for road network design problems (NDPs). We train a graph neural network (GNN) to approximate the solution of the user equilibrium (UE) traffic…

Neural and Evolutionary Computing · Computer Science 2023-12-12 Bahman Madadi , Goncalo Homem de Almeida Correia

We propose a novel graph-driven generative model, that unifies multiple heterogeneous learning tasks into the same framework. The proposed model is based on the fact that heterogeneous learning tasks, which correspond to different…

Machine Learning · Computer Science 2019-11-21 Wenlin Wang , Hongteng Xu , Zhe Gan , Bai Li , Guoyin Wang , Liqun Chen , Qian Yang , Wenqi Wang , Lawrence Carin

Dynamic GNNs, which integrate temporal and spatial features in Electroencephalography (EEG) data, have shown great potential in automating seizure detection. However, fully capturing the underlying dynamics necessary to represent brain…

Machine Learning · Computer Science 2025-10-28 Rikuto Kotoge , Zheng Chen , Tasuku Kimura , Yasuko Matsubara , Takufumi Yanagisawa , Haruhiko Kishima , Yasushi Sakurai

Traffic forecasting is important for the success of intelligent transportation systems. Deep learning models, including convolution neural networks and recurrent neural networks, have been extensively applied in traffic forecasting problems…

Machine Learning · Computer Science 2022-07-08 Weiwei Jiang , Jiayun Luo

Traffic flow prediction is an integral part of an intelligent transportation system and thus fundamental for various traffic-related applications. Buses are an indispensable way of moving for urban residents with fixed routes and schedules,…

Machine Learning · Computer Science 2022-02-22 Xiangjie Kong , Kailai Wang , Mingliang Hou , Feng Xia , Gour Karmakar , Jianxin Li

Graph Neural Networks (GNNs) have become the state-of-the-art method for many applications on graph structured data. GNNs are a model for graph representation learning, which aims at learning to generate low dimensional node embeddings that…

Machine Learning · Computer Science 2022-05-23 Davide Buffelli , Fabio Vandin

Graph neural networks (GNNs) excel in graph representation learning by integrating graph structure and node features. Existing GNNs, unfortunately, fail to account for the uncertainty of class probabilities that vary with the depth of the…

Machine Learning · Computer Science 2025-06-17 Qingfeng Chen , Shiyuan Li , Yixin Liu , Shirui Pan , Geoffrey I. Webb , Shichao Zhang

Electronic Health Records (EHR) have been heavily used in modern healthcare systems for recording patients' admission information to hospitals. Many data-driven approaches employ temporal features in EHR for predicting specific diseases,…

Machine Learning · Computer Science 2021-12-07 Chang Lu , Chandan K. Reddy , Yue Ning
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