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Cell signaling, gene expression, and metabolism are affected by cell-cell heterogeneity and random changes in the environment. The effects of such fluctuations on cell signaling and gene expression have recently been studied intensively…

Biological Physics · Physics 2015-04-02 A. -K. Gustavsson , C. B. Adiels , B. Mehlig , M. Goksör

Mechanics and biochemical signaling are both often deregulated in cancer, leading to cancer cell phenotypes that exhibit increased invasiveness, proliferation, and survival. The dynamics and interactions of cytoskeletal components control…

Biological Physics · Physics 2018-07-27 Fabian Spill , Chris Bakal , Michael Mak

Many intracellular processes continue to oscillate during the cell cycle. Although it is not well-understood how they are affected by discontinuities in the cellular environment, the general assumption is that oscillations remain robust…

Molecular Networks · Quantitative Biology 2014-09-25 David S. Tourigny

The interplay between circadian and reward function is well understood in animal models, and is of growing interest as an aetiological explanation in psychopathologies. Circadian modulation of reward function has been demonstrated in human…

Neurons and Cognition · Quantitative Biology 2018-12-12 Greg Murray , Catherine Orr , Jamie E. M. Byrne , Matthew E. Hughes , Susan L. Rossell , Sheri L. Johnson

We provide a time-dependent Dyson map and metric for the two dimensional harmonic oscillator with a non-Hermitian $i xy$ coupling term. This particular time-independent model exhibits spontaneously broken $\mathcal{PT}$-symmetry and becomes…

Quantum Physics · Physics 2020-01-01 Andreas Fring , Thomas Frith

We describe spontaneous symmetry breaking in the powers of two optical modes coupled into a ring resonator, using a pair of coupled Lorentzian equations, featuring tunable self- and cross-phase modulation terms. We investigate a wide…

Optics · Physics 2020-01-29 Lewis Hill , Gian-Luca Oppo , Michael T. M. Woodley , Pascal Del Haye

Different types of synchronization states are found when non-linear chemical oscillators are embedded into an active medium that interconnects the oscillators but also contributes to the system dynamics. Using different theoretical tools,…

Adaptation and Self-Organizing Systems · Physics 2021-03-09 David García-Selfa , Gourab Ghoshal , Christian Bick , Juan Pérez-Mercader , Alberto P. Muñuzuri

Active phenomena which involve force generation and motion play a key role in a number of phenomena in living cells such as cell motility, muscle contraction and the active transport of material and organelles. Here we discuss mechanical…

Biological Physics · Physics 2007-05-23 Frank Julicher

We discuss a classical nonlinear oscillator, which is proved to be a superintegrable system for which the bounded motions are quasiperiodic oscillations and the unbounded (scattering) motions are represented by hyperbolic functions. This…

Mathematical Physics · Physics 2007-05-23 José F. Cariñena , Manuel F. Rañada , Mariano Santander

During the last decade, possibilities to realize new phenomena and create new applications by varying system properties in time have gained increasing attention in many research fields, spanning a wide range from acoustics to optics. While…

Classical Physics · Physics 2022-11-24 G. Ptitcyn , M. S. Mirmoosa , A. Sotoodehfar , S. A. Tretyakov

Daylight plays a major role in the wake/sleep cycle in humans. Indeed, the wake/sleep system stems from biological systems that follow a circadian rhythm determined by the light/dark alternation. The oscillations can be modeled by the…

Biological Physics · Physics 2022-01-13 F. L. Tsafack Tayong , R. Yamapi , G. Filatrella

Empirical time series often contain observational noise. We investigate the effect of this noise on the estimated parameters of models fitted to the data. For data of physiological tremor, i.e. a small amplitude oscillation of the…

chao-dyn · Physics 2015-06-24 J. Timmer

Kaplan and Rajendran have recently demonstrated that non-linear and state-dependent terms can be consistently added to quantum field theory to yield causal non-linear time evolution in quantum mechanics. Causal non-linear theories have the…

Quantum Physics · Physics 2023-05-22 Joseph Broz , Bingran You , Sumanta Khan , Hartmut Haeffner , David E. Kaplan , Surjeet Rajendran

Cellular behavior is governed by gene regulatory processes that are intrinsically dynamic and nonlinear, and are subject to non-negligible amounts of random fluctuations. Such conditions are ubiquitous in physical systems, where they have…

Molecular Networks · Quantitative Biology 2011-09-21 Jordi Garcia-Ojalvo

We show experimentally that parametric interaction can induce a cooperative oscillation of non simultaneously resonant transverse modes in an optical parametric oscillator. More generally, this effect is expected to occur in any spatially…

We study the effects of time delayed linear and nonlinear feedbacks on the dynamics of a single Hopf bifurcation oscillator. Our numerical and analytic investigations reveal a host of complex temporal phenomena such as phase slips,…

chao-dyn · Physics 2009-10-31 D. V. Ramana Reddy , A. Sen , G. L. Johnston

Oscillations in nonequilibrium noisy systems are important physical phenomena. These oscillations can happen in autonomous biochemical oscillators such as circadian clocks. They can also manifest as subharmonic oscillations in periodically…

Statistical Mechanics · Physics 2019-12-25 Daniele De Martino , Andre C Barato

Model optomechanical systems with photon-vibration interactions linear, quadratic, and cubic in mechanical displacements are studied under conditions for adiabatic elimination of the photon field. The opportunity of transformation of…

Quantum Physics · Physics 2025-04-09 A. P. Saiko , G. A. Rusetsky , S. A. Markevich , R. Fedaruk

Parametric oscillators are examples of externally driven systems that can exhibit two stable states with opposite phase depending on the initial conditions. In this work, we propose to study what happens when the external forcing is…

Pattern Formation and Solitons · Physics 2024-02-13 Benjamin Apffel , Romain Fleury

Nonlinear oscillators are commonly encountered in a wide range of physical and engineering systems, exhibiting rich and complex dynamics. Among these, the Van der Pol oscillator is well known for its self-sustained limit cycle behavior.…

Chaotic Dynamics · Physics 2025-11-17 Samaira Tibrewal , Soumyajit Seth
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