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Relative compression, where a set of similar strings are compressed with respect to a reference string, is a very effective method of compressing DNA datasets containing multiple similar sequences. Relative compression is fast to perform…

Quantitative Methods · Quantitative Biology 2011-06-21 Shanika Kuruppu , Simon Puglisi , Justin Zobel

Nowadays, the digital world is most focused on storage space and speed. With the growing demand for better bandwidth utilization, efficient image data compression techniques have emerged as an important factor for image data transmission…

Information Theory · Computer Science 2012-09-26 Rehna. V. J , Jeyakumar. M. K

Compressing integer keys is a fundamental operation among multiple communities, such as database management (DB), information retrieval (IR), and high-performance computing (HPC). Recent advances in \emph{learned indexes} have inspired the…

Databases · Computer Science 2024-12-17 Qiyu Liu , Siyuan Han , Jianwei Liao , Jin Li , Jingshu Peng , Jun Du , Lei Chen

Neural compression algorithms are typically based on autoencoders that require specialized encoder and decoder architectures for different data modalities. In this paper, we propose COIN++, a neural compression framework that seamlessly…

Machine Learning · Computer Science 2022-12-09 Emilien Dupont , Hrushikesh Loya , Milad Alizadeh , Adam Goliński , Yee Whye Teh , Arnaud Doucet

New directions in computing and algorithms has lead to some new applications that have tolerance to imprecision. Although, These applications are creating large volumes of data which exceeds the capability of today's computing systems.…

Distributed, Parallel, and Cluster Computing · Computer Science 2017-01-16 Navid Mirnouri

Quantization is commonly used in Deep Neural Networks (DNNs) to reduce the storage and computational complexity by decreasing the arithmetical precision of activations and weights, a.k.a. tensors. Efficient hardware architectures employ…

Machine Learning · Computer Science 2023-11-23 Bahareh Khabbazan , Marc Riera , Antonio González

In modern age, the increasing complexity of computation and communication technology is leading us towards the necessity of new paradigm. As a result, unconventional approach like DNA coding theory is gaining considerable attention. The…

Information Theory · Computer Science 2023-08-07 Mandrita Mondal , Kumar S. Ray

Recent advances in generative compression methods have demonstrated remarkable progress in enhancing the perceptual quality of compressed data, especially in scenarios with low bitrates. However, their efficacy and applicability to achieve…

Computer Vision and Pattern Recognition · Computer Science 2023-12-18 Qi Mao , Tinghan Yang , Yinuo Zhang , Zijian Wang , Meng Wang , Shiqi Wang , Siwei Ma

Image compression has been a frequent topic of presentations at ADASS. Compression is often viewed as just a technique to fit more data into a smaller space. Rather, the packing of data - its "density" - affects every facet of local data…

Instrumentation and Methods for Astrophysics · Physics 2009-10-21 Robert L. Seaman , Richard L. White , William D. Pence

Sequential data is being generated at an unprecedented pace in various forms, including text and genomic data. This creates the need for efficient compression mechanisms to enable better storage, transmission and processing of such data. To…

Computation and Language · Computer Science 2018-11-21 Mohit Goyal , Kedar Tatwawadi , Shubham Chandak , Idoia Ochoa

Since security is one of the most important issues, the evolve of cryptography and cryptographic analysis are considered as the fields of on-going research. The latest development on this field is DNA cryptography. It has emerged after the…

Cryptography and Security · Computer Science 2015-03-17 Beenish Anam , Kazi Sakib , Md. Alamgir Hossain , Keshav Dahal

DNA sequencing is revolutionising the field of medicine. DNA sequencers, the machines which perform DNA sequencing, have evolved from the size of a fridge to that of a mobile phone over the last two decades. The cost of sequencing a human…

Genomics · Quantitative Biology 2021-01-14 Hasindu Gamaarachchi

One requirement of maintaining digital information is storage. With the latest advances in the digital world, new emerging media types have required even more storage space to be kept than before. In fact, in many cases it is required to…

Data Structures and Algorithms · Computer Science 2025-01-22 Vasileios Alevizos , Nikitas Gerolimos , Sabrina Edralin , Clark Xu , Akebu Simasiku , Georgios Priniotakis , George Papakostas , Zongliang Yue

The ever-growing volume of data in imaging sciences stemming from the advancements in imaging technologies, necessitates efficient and reliable storage solutions for such large datasets. This study investigates the compression of industrial…

Image and Video Processing · Electrical Eng. & Systems 2025-10-24 Bardia Hejazi , Keerthana Chand , Tobias Fritsch , Giovanni Bruno

Forgery facial images and videos have increased the concern of digital security. It leads to the significant development of detecting forgery data recently. However, the data, especially the videos published on the Internet, are usually…

Computer Vision and Pattern Recognition · Computer Science 2023-02-14 Jiajun Huang , Xinqi Zhu , Chengbin Du , Siqi Ma , Surya Nepal , Chang Xu

The training of deep neural networks (DNNs) always requires intensive resources for both computation and data storage. Thus, DNNs cannot be efficiently applied to mobile phones and embedded devices, which severely limits their applicability…

Computer Vision and Pattern Recognition · Computer Science 2021-06-21 Qigong Sun , Xiufang Li , Fanhua Shang , Hongying Liu , Kang Yang , Licheng Jiao , Zhouchen Lin

In this paper we have proposed a method that uses chaotic logistic mapping and DNA encoding to encrypt the image. A 32 bit ASCII private key is used to diffuse the image. The results demonstrated clearly show that encryption algorithm based…

Cryptography and Security · Computer Science 2020-03-17 Sakshi Patel , Bharath K P , Rajesh Kumar Muthu

The surge in demand for cost-effective, durable long-term archival media, coupled with density limitations of contemporary magnetic media, has resulted in synthetic DNA emerging as a promising new alternative. Despite its benefits, storing…

Databases · Computer Science 2024-05-28 Eugenio Marinelli , Yiqing Yan , Virginie Magnone , Pascal Barbry , Raja Appuswamy

In this paper, we consider a concatenated coding based class of DNA storage codes in which the selected molecules are constrained to be taken from an ``inner'' codebook associated with the sequencing channel. This codebook is used in a…

Information Theory · Computer Science 2025-06-19 Yan Hao Ling , Jonathan Scarlett

Technologies for sequencing (reading) and synthesizing (writing) DNA have progressed on a Moore's law-like trajectory over the last three decades. This has motivated the idea of using DNA for data storage. Theoretically, DNA-based storage…

Emerging Technologies · Computer Science 2023-07-07 Ajay Manicka , Andrew Stephan , Sriram Chari , Gemma Mendonsa , Peyton Okubo , John Stolzberg-Schray , Anil Reddy , Marc Riedel