English
Related papers

Related papers: Relating tSNE and UMAP to Classical Dimensionality…

200 papers

UMAP is a non-parametric graph-based dimensionality reduction algorithm using applied Riemannian geometry and algebraic topology to find low-dimensional embeddings of structured data. The UMAP algorithm consists of two steps: (1) Compute a…

Machine Learning · Computer Science 2021-08-31 Tim Sainburg , Leland McInnes , Timothy Q Gentner

We introduce "TriMap"; a dimensionality reduction technique based on triplet constraints, which preserves the global structure of the data better than the other commonly used methods such as t-SNE, LargeVis, and UMAP. To quantify the global…

Machine Learning · Computer Science 2022-03-29 Ehsan Amid , Manfred K. Warmuth

Dimensionality reduction methods are unsupervised approaches which learn low-dimensional spaces where some properties of the initial space, typically the notion of "neighborhood", are preserved. Such methods usually require propagation on…

Computer Vision and Pattern Recognition · Computer Science 2022-06-16 Yannis Kalantidis , Carlos Lassance , Jon Almazan , Diane Larlus

Partial Differential Equations (PDEs) are central to science and engineering. Since solving them is computationally expensive, a lot of effort has been put into approximating their solution operator via both traditional and recently…

Machine Learning · Computer Science 2025-02-14 Alessandro Longhi , Danny Lathouwers , Zoltán Perkó

Uniform Manifold Approximation and Projection (UMAP) is one of the state-of-the-art methods for dimensionality reduction and data visualization. This is a tutorial and survey paper on UMAP and its variants. We start with UMAP algorithm…

Human-Computer Interaction · Computer Science 2021-09-07 Benyamin Ghojogh , Ali Ghodsi , Fakhri Karray , Mark Crowley

We propose a new dimensionality reduction toolkit designed to address some of the challenges faced by traditional methods like UMAP and tSNE such as loss of global structure and computational efficiency. Built on the JAX framework, DiRe…

Machine Learning · Computer Science 2025-08-19 Alexander Kolpakov , Igor Rivin

Dimensionality reduction algorithms are often used to visualise high-dimensional data. Previously, studies have used prior information to enhance or suppress expected patterns in projections. In this paper, we adapt such techniques for…

Machine Learning · Computer Science 2024-05-16 Daniel M. Bot , Jan Aerts

Dimensionality reduction methods are employed to decrease data dimensionality, either to enhance machine learning performance or to facilitate data visualization in two or three-dimensional spaces. These methods typically fall into two…

Machine Learning · Computer Science 2025-08-26 Berat Dogan

Neighbor embeddings are a family of methods for visualizing complex high-dimensional datasets using $k$NN graphs. To find the low-dimensional embedding, these algorithms combine an attractive force between neighboring pairs of points with a…

Machine Learning · Computer Science 2024-06-06 Jan Niklas Böhm , Philipp Berens , Dmitry Kobak

Finding the similarities and differences between groups of datasets is a fundamental analysis task. For high-dimensional data, dimensionality reduction (DR) methods are often used to find the characteristics of each group. However, existing…

Machine Learning · Computer Science 2021-10-28 Takanori Fujiwara , Xinhai Wei , Jian Zhao , Kwan-Liu Ma

Modern methods in dimensionality reduction are dominated by nonlinear attraction-repulsion force-based methods (this includes t-SNE, UMAP, ForceAtlas2, LargeVis, and many more). The purpose of this paper is to demonstrate that all such…

Machine Learning · Computer Science 2022-08-16 Yulan Zhang , Anna C. Gilbert , Stefan Steinerberger

Dimensionality reduction (DR) techniques map high-dimensional data into lower-dimensional spaces. Yet, current DR techniques are not designed to explore semantic structure that is not directly available in the form of variables or class…

Machine Learning · Computer Science 2025-06-19 Artur André Oliveira , Mateus Espadoto , Roberto Hirata , Roberto M. Cesar , Alex C. Telea

Universal Multimodal Retrieval (UMR) aims to enable search across various modalities using a unified model, where queries and candidates can consist of pure text, images, or a combination of both. Previous work has attempted to adopt…

Computation and Language · Computer Science 2025-04-02 Xin Zhang , Yanzhao Zhang , Wen Xie , Mingxin Li , Ziqi Dai , Dingkun Long , Pengjun Xie , Meishan Zhang , Wenjie Li , Min Zhang

In this paper, the existing Scheduling Dimension Reduction (SDR) methods for Linear Parameter-Varying (LPV) models are reviewed and a Deep Neural Network (DNN) approach is developed that achieves higher model accuracy under scheduling…

Systems and Control · Electrical Eng. & Systems 2020-12-10 P. J. W. Koelewijn , R. Tóth

With the proliferation of Graph Neural Network (GNN) methods stemming from contrastive learning, unsupervised node representation learning for graph data is rapidly gaining traction across various fields, from biology to molecular dynamics,…

Machine Learning · Computer Science 2024-08-01 Jihee You , So Won Jeong , Claire Donnat

Manifold learning (ML) aims to seek low-dimensional embedding from high-dimensional data. The problem is challenging on real-world datasets, especially with under-sampling data, and we find that previous methods perform poorly in this case.…

Machine Learning · Computer Science 2022-07-27 Zelin Zang , Siyuan Li , Di Wu , Ge Wang , Lei Shang , Baigui Sun , Hao Li , Stan Z. Li

Dimensionality reduction is crucial both for visualization and preprocessing high dimensional data for machine learning. We introduce a novel method based on a hierarchy built on 1-nearest neighbor graphs in the original space which is used…

Computer Vision and Pattern Recognition · Computer Science 2022-05-31 M. Saquib Sarfraz , Marios Koulakis , Constantin Seibold , Rainer Stiefelhagen

The t-distributed Stochastic Neighbor Embedding (t-SNE) algorithm is a ubiquitously employed dimensionality reduction (DR) method. Its non-parametric nature and impressive efficacy motivated its parametric extension. It is however bounded…

Machine Learning · Computer Science 2020-10-06 Francesco Crecchi , Cyril de Bodt , Michel Verleysen , John A. Lee , Davide Bacciu

ParaDime is a framework for parametric dimensionality reduction (DR). In parametric DR, neural networks are trained to embed high-dimensional data items in a low-dimensional space while minimizing an objective function. ParaDime builds on…

Machine Learning · Computer Science 2023-05-31 Andreas Hinterreiter , Christina Humer , Bernhard Kainz , Marc Streit

Dense vector retrieval is the practical backbone of Retrieval- Augmented Generation (RAG), but similarity search can suffer from precision limitations. Conversely, utility-based approaches leveraging LLM re-ranking often achieve superior…

Information Retrieval · Computer Science 2026-04-27 Rajinder Sandhu , Di Mu , Cheng Chang , Md Shahriar Tasjid , Himanshu Rai , Maksims Volkovs , Ga Wu