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Background: Electronic Health Records hold detailed longitudinal information about each patient's health status and general clinical history, a large portion of which is stored within the unstructured text. Existing approaches focus mostly…

We introduceGraphGPT, a novel self-supervised generative pre-trained model for graph learning based on the Graph Eulerian Transformer (GET). First, we propose GET, which combines a standard transformer encoder or decoder architecture with…

Machine Learning · Computer Science 2025-06-09 Qifang Zhao , Weidong Ren , Tianyu Li , Hong Liu , Xingsheng He , Xiaoxiao Xu

Event-driven genetic programming representations have been shown to outperform traditional imperative representations on interaction-intensive problems. The event-driven approach organizes genome content into modules that are triggered in…

Neural and Evolutionary Computing · Computer Science 2021-08-03 Matthew Andres Moreno , Santiago Rodriguez Papa , Alexander Lalejini , Charles Ofria

Generative pretraining (the "GPT" in ChatGPT) enables language models to learn from vast amounts of internet text without human supervision. This approach has driven breakthroughs across AI by allowing deep neural networks to learn from…

Neurons and Cognition · Quantitative Biology 2025-09-23 Thomas Serre , Ellie Pavlick

Materials language processing (MLP) is one of the key facilitators of materials science research, as it enables the extraction of structured information from massive materials science literature. Prior works suggested high-performance MLP…

Computation and Language · Computer Science 2023-08-21 Jaewoong Choi , Byungju Lee

Data-to-text generation has recently attracted substantial interests due to its wide applications. Existing methods have shown impressive performance on an array of tasks. However, they rely on a significant amount of labeled data for each…

Computation and Language · Computer Science 2020-10-13 Wenhu Chen , Yu Su , Xifeng Yan , William Yang Wang

This study introduces GPTA, a Large Language Model assistance training framework, that enhances the training of downstream task models via prefix prompt. By minimizing data exposure to LLM, the framework addresses the security and legal…

Computation and Language · Computer Science 2024-04-02 Xiao Liu , Jiawei Zhang

Many scientific fields, from medicine to seismology, rely on analyzing sequences of events over time to understand complex systems. Traditionally, machine learning models must be built and trained from scratch for each new dataset, which is…

Machine Learning · Computer Science 2026-01-21 David Berghaus , Patrick Seifner , Kostadin Cvejoski , Ramses J. Sanchez

Temporal point process is widely used for sequential data modeling. In this paper, we focus on the problem of modeling sequential event propagation in graph, such as retweeting by social network users, news transmitting between websites,…

Social and Information Networks · Computer Science 2020-05-06 Weichang Wu , Huanxi Liu , Xiaohu Zhang , Yu Liu , Hongyuan Zha

Unsupervised pre-training of large neural models has recently revolutionized Natural Language Processing. By warm-starting from the publicly released checkpoints, NLP practitioners have pushed the state-of-the-art on multiple benchmarks…

Computation and Language · Computer Science 2022-08-10 Sascha Rothe , Shashi Narayan , Aliaksei Severyn

In recent years, natural language processing (NLP) models have demonstrated remarkable capabilities in various domains beyond traditional text generation. In this work, we introduce PeptideGPT, a protein language model tailored to generate…

Machine Learning · Computer Science 2024-10-28 Aayush Shah , Chakradhar Guntuboina , Amir Barati Farimani

Amidst the rapid advancements in generative language models, the investigation of how training data shapes the performance of GPT models is still emerging. This paper presents GPTfluence, a novel approach that leverages a featurized…

Computation and Language · Computer Science 2024-10-04 Yekun Chai , Qingyi Liu , Shuohuan Wang , Yu Sun , Qiwei Peng , Hua Wu

Large Language Models (LLMs), such as Generative Pre-trained Transformers (GPTs) are revolutionizing the generation of human-like text, producing contextually relevant and syntactically correct content. Despite challenges like biases and…

Computation and Language · Computer Science 2025-08-04 Alper Yaman , Jannik Schwab , Christof Nitsche , Abhirup Sinha , Marco Huber

Generative models have shown promising results in capturing human mobility characteristics and generating synthetic trajectories. However, it remains challenging to ensure that the generated geospatial mobility data is semantically…

Machine Learning · Computer Science 2025-10-28 Ammar Haydari , Dongjie Chen , Zhengfeng Lai , Michael Zhang , Chen-Nee Chuah

Generative Pre-trained Transformer 4 (GPT-4) is the fourth-generation language model in the GPT series, developed by OpenAI, which promises significant advancements in the field of natural language processing (NLP). In this research…

Computation and Language · Computer Science 2023-05-08 Jawid Ahmad Baktash , Mursal Dawodi

Natural Language Processing (NLP) has witnessed a transformative leap with the advent of transformer-based architectures, which have significantly enhanced the ability of machines to understand and generate human-like text. This paper…

Computation and Language · Computer Science 2025-03-27 Tianhao Wu , Yu Wang , Ngoc Quach

Today, the rapid growth of applications reliant on datacenters calls for new advancements to meet the increasing traffic and computational demands. Traffic traces from datacenters are essential for further development and optimization of…

Networking and Internet Architecture · Computer Science 2025-01-22 Chen Griner

The rapid advancement of Large Language Models (LLMs) has revolutionized various sectors by automating routine tasks, marking a step toward the realization of Artificial General Intelligence (AGI). However, they still struggle to…

Machine Learning · Computer Science 2024-02-21 Zihao Tang , Zheqi Lv , Shengyu Zhang , Fei Wu , Kun Kuang

Large-scale pre-trained models (PTMs) such as BERT and GPT have recently achieved great success in Natural Language Processing and Computer Vision domains. However, the development of PTMs on healthcare time-series data is lagging…

Machine Learning · Computer Science 2024-09-10 Ziyang Song , Qincheng Lu , Hao Xu , He Zhu , David L. Buckeridge , Yue Li

Tracking entities in procedural language requires understanding the transformations arising from actions on entities as well as those entities' interactions. While self-attention-based pre-trained language encoders like GPT and BERT have…

Computation and Language · Computer Science 2019-09-09 Aditya Gupta , Greg Durrett