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Rearrangement mechanisms of the water dimer and the cage form of the water hexamer are examined theoretically with particular reference to tunneling splittings and spectroscopy. The three lowest barrier rearrangements of the water dimer are…

Atomic and Molecular Clusters · Physics 2015-06-26 David J. Wales

Transformers have recently gained attention in the computer vision domain due to their ability to model long-range dependencies. However, the self-attention mechanism, which is the core part of the Transformer model, usually suffers from…

Computer Vision and Pattern Recognition · Computer Science 2023-07-28 Reza Azad , René Arimond , Ehsan Khodapanah Aghdam , Amirhossein Kazerouni , Dorit Merhof

Interacting lattice Hamiltonians at high temperature generically give rise to energy transport governed by the classical diffusion equation; however, predicting the rate of diffusion requires numerical simulation of the microscopic quantum…

Strongly Correlated Electrons · Physics 2023-12-04 En-Jui Kuo , Brayden Ware , Peter Lunts , Mohammad Hafezi , Christopher David White

The double proton transfer (DPT) reaction in hydrated formic acid dimer (FAD) is investigated at molecular-level detail. For this, a global and reactive machine learned (ML) potential energy surface (PES) is developed to run extensive (more…

Chemical Physics · Physics 2022-06-22 Kai Töpfer , Silvan Käser , Markus Meuwly

The dynamics of water molecules plays a vital role in understanding water. We combined computer simulation and deep learning to study the dynamics of H-bonds between water molecules. Based on ab initio molecular dynamics simulations and a…

Disordered Systems and Neural Networks · Physics 2021-10-19 Jie Huang , Gang Huang , Shiben Li

We have simulated structure and dynamics of water in the grooves of a DNA duplex using moleculear dynamics simulations. We find signatures of a dynamical transition in both translational and orientational dynamics of water molecules in both…

Soft Condensed Matter · Physics 2008-09-23 Debasmita Biswal , Biman Jana , Subrata Pal , Biman Bagchi

Transition metal dichalcogenide (TMD) bilayers are a new class of tunable moir\'e systems attracting interest as quantum simulators of strongly-interacting electrons in two dimensions. In particular, recent theory predicts that the…

Strongly Correlated Electrons · Physics 2021-01-01 Kevin Slagle , Liang Fu

The Sabatier principle establishes a fundamental trade-off in heterogeneous electrocatalysis.In the hydrogen evolution reaction (HER), this trade-off is manifested by the coupling of Volmer step, which requires strong hydrogen adsorption,…

Materials Science · Physics 2025-10-14 Zi-Xuan Yang , Lei Li , Tao Huang , Hui Wan , X. S. Wang , Gui-Fang Huang , Wangyu Hu , Wei-Qing Huang

Current approaches using sequential networks have shown promise in estimating field variables for dynamical systems, but they are often limited by high rollout errors. The unresolved issue of rollout error accumulation results in unreliable…

Machine Learning · Computer Science 2024-10-31 Parsa Esmati , Amirhossein Dadashzadeh , Vahid Goodarzi , Nicolas Larrosa , Nicolò Grilli

We investigate the charge transfer characteristics of one and two excess charges in a DNA base-pair dimer using a model Hamiltonian approach. The electron part comprises diagonal and off-diagonal Coulomb matrix elements such a correlated…

Strongly Correlated Electrons · Physics 2015-05-14 Sabine Tornow , Ralf Bulla , Frithjof B. Anders , Gertrud Zwicknagl

The penetration of distributed renewable energy (DRE) greatly raises the risk of distribution network operation such as peak shaving and voltage stability. Battery energy storage (BES) has been widely accepted as the most potential…

Optimization and Control · Mathematics 2017-07-03 Chenghui Tang , Jian Xu , Yuanzhang Sun , Siyang Liao , Deping Ke , Xiong Li

Using artificial dissipation to tame entanglement growth, we chart the emergence of diffusion in a generic interacting lattice model for varying U(1) charge densities. We follow the crossover from ballistic to diffusive transport above a…

Strongly Correlated Electrons · Physics 2026-04-29 N. S. Srivatsa , Oliver Lunt , Tibor Rakovszky , Curt von Keyserlingk

This paper examines a fluid antenna (FA)-assisted simultaneous wireless information and power transfer (SWIPT) system. Unlike traditional SWIPT systems with fixed-position antennas (FPAs), our FA-assisted system enables dynamic…

Signal Processing · Electrical Eng. & Systems 2024-07-25 Liaoshi Zhou , Junteng Yao , Tuo Wu , Ming Jin , Chau Yuen , Fumiyuki Adachi

We use first-principles calculations based on density functional theory to investigate the magnetic exchange interaction of Fe clusters on Rh(111) and Ru(0001). We consider dimers, trimers, tetramers, and pentamers of different shape in fcc…

Mesoscale and Nanoscale Physics · Physics 2013-12-13 F. Otte , P. Ferriani , S. Heinze

Many studies have revealed that confined water chain flipping is closely related to the spatial size and even quantum effects of the confinement environment. Here, we show that these are not the only factors that affect the flipping process…

Biological Physics · Physics 2021-07-07 Le Jin , Xinrui Yang , Yu Zhu , Zhiyuan Zhang , Rui Liu , Zhigang Wang

We introduce the dissipation-assisted operator evolution (DAOE) method for calculating transport properties of strongly interacting lattice systems in the high temperature regime. DAOE is based on evolving observables in the Heisenberg…

Strongly Correlated Electrons · Physics 2020-04-14 Tibor Rakovszky , C. W. von Keyserlingk , Frank Pollmann

Up to now, for the conventional exchange bias (EB) systems there has been one pinning phase and one pinned phase, and the pinning and pinned phases are inherent to the material and do not mutually transform into each other. Interestingly,…

Materials Science · Physics 2019-05-15 P. Song , L. Ma , G. K. Li , C. M. Zhen , C. Wang , W. H. Wang , E. K. Liu , J. L. Chen , G. H. Wu , Y. H. Xia , J. Zhang , C. M. Xie , H. Li , D. L. Hou

The Fast Fourier Transform (FFT) correlation approach to protein-protein docking can evaluate the energies of billions of docked conformations on a grid if the energy is described in the form of a correlation function. Here, this…

Biomolecules · Quantitative Biology 2007-05-23 D. Kozakov , R. Brenke , S. Comeau , S. Vajda

We employ Molecular Dynamics (MD) and Time-Dependent Density Functional Theory (TDDFT) to explore the fluorescence of Hydrogen-bonded dimer and trimer structures of Cyclic FF (Phe- Phe) molecules. We show that in some of these…

Chemical Physics · Physics 2019-06-19 Sijo K. Joseph , Natalia Kuritz , Eldad Yahel , Nadezda Lapshina , Gil Rosenman , Amir Natan

Quantum kinetically constrained models can exhibit a wealth of dynamical phenomena ranging from anomalous transport to Hilbert-space fragmentation (HSF). We study a class of one-dimensional particle number conserving systems where particle…

Statistical Mechanics · Physics 2023-11-02 Cheng Wang , Zhi-Cheng Yang
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