Related papers: BioREx: Improving Biomedical Relation Extraction b…
Relation extraction typically aims to extract semantic relationships between entities from the unstructured text. One of the most essential data sources for relation extraction is the spoken language, such as interviews and dialogues.…
Real-world Relation Extraction (RE) tasks are challenging to deal with, either due to limited training data or class imbalance issues. In this work, we present Data Augmented Relation Extraction(DARE), a simple method to augment training…
Relation extraction between drugs plays a crucial role in identifying drug drug interactions and predicting side effects. The advancement of machine learning methods in relation extraction, along with the development of large medical text…
The advancement of biomedical named entity recognition (BNER) and biomedical relation extraction (BRE) researches promotes the development of text mining in biological domains. As a cornerstone of BRE, robust BNER system is required to…
The relation extraction (RE) in complex scenarios faces challenges such as diverse relation types and ambiguous relations between entities within a single sentence, leading to the poor performance of pure "text-in, text-out" language models…
With the advent of artificial intelligence (AI), many researchers are attempting to extract structured information from document-level biomedical literature by fine-tuning large language models (LLMs). However, they face significant…
The DocRED dataset is one of the most popular and widely used benchmarks for document-level relation extraction (RE). It adopts a recommend-revise annotation scheme so as to have a large-scale annotated dataset. However, we find that the…
With the explosive growth of biomedical literature, designing automatic tools to extract information from the literature has great significance in biomedical research. Recently, transformer-based BERT models adapted to the biomedical domain…
Relation classification is one of the key topics in information extraction, which can be used to construct knowledge bases or to provide useful information for question answering. Current approaches for relation classification are mainly…
Relation Extraction (RE), the task of detecting and characterizing semantic relations between entities in text, has gained much importance in the last two decades, mainly in the biomedical domain. Many papers have been published on Relation…
We introduce a biomedical information extraction (IE) pipeline that extracts biological relationships from text and demonstrate that its components, such as named entity recognition (NER) and relation extraction (RE), outperform…
Biomedical knowledge graphs (KGs) are vital for drug discovery and clinical decision support but remain incomplete. Large language models (LLMs) excel at extracting biomedical relations, yet their outputs lack standardization and alignment…
Sentence-level relation extraction (RE) aims at identifying the relationship between two entities in a sentence. Many efforts have been devoted to this problem, while the best performing methods are still far from perfect. In this paper, we…
Enterprise relation extraction aims to detect pairs of enterprise entities and identify the business relations between them from unstructured or semi-structured text data, and it is crucial for several real-world applications such as risk…
Because protein-protein interactions (PPIs) are crucial to understand living systems, harvesting these data is essential to probe disease development and discern gene/protein functions and biological processes. Some curated datasets contain…
Speech Relation Extraction (SpeechRE) aims to extract relation triplets directly from speech. However, existing benchmark datasets rely heavily on synthetic data, lacking sufficient quantity and diversity of real human speech. Moreover,…
Open relation extraction is the task of extracting open-domain relation facts from natural language sentences. Existing works either utilize heuristics or distant-supervised annotations to train a supervised classifier over pre-defined…
The goal of open relation extraction (OpenRE) is to develop an RE model that can generalize to new relations not encountered during training. Existing studies primarily formulate OpenRE as a clustering task. They first cluster all test…
Multimodal relation extraction (MRE) is the task of identifying the semantic relationships between two entities based on the context of the sentence image pair. Existing retrieval-augmented approaches mainly focused on modeling the…
Relation extraction is the task of extracting semantic relations between entities in a sentence. It is an essential part of some natural language processing tasks such as information extraction, knowledge extraction, and knowledge base…