Related papers: BioREx: Improving Biomedical Relation Extraction b…
Automated relation extraction (RE) from biomedical literature is critical for many downstream text mining applications in both research and real-world settings. However, most existing benchmarking datasets for bio-medical RE only focus on…
Document-Level Biomedical Relation Extraction (Bio-RE) aims to identify relations between biomedical entities within extensive texts, serving as a crucial subfield of biomedical text mining. Existing Bio-RE methods struggle with…
Biological relation networks contain rich information for understanding the biological mechanisms behind the relationship of entities such as genes, proteins, diseases, and chemicals. The vast growth of biomedical literature poses…
The surging amount of biomedical literature & digital clinical records presents a growing need for text mining techniques that can not only identify but also semantically relate entities in unstructured data. In this paper we propose a text…
Extracting biographical information from online documents is a popular research topic among the information extraction (IE) community. Various natural language processing (NLP) techniques such as text classification, text summarisation and…
Distant supervision (DS) is a well established technique for creating large-scale datasets for relation extraction (RE) without using human annotations. However, research in DS-RE has been mostly limited to the English language.…
Relation extraction is a fundamental problem in natural language processing. Most existing models are defined for relation extraction in the general domain. However, their performance on specific domains (e.g., biomedicine) is yet unclear.…
Relation Extraction (RE) aims to label relations between groups of marked entities in raw text. Most current RE models learn context-aware representations of the target entities that are then used to establish relation between them. This…
Relation extraction (RE) involves identifying the relations between entities from underlying content. RE serves as the foundation for many natural language processing (NLP) and information retrieval applications, such as knowledge graph…
Objective: Medical relations are the core components of medical knowledge graphs that are needed for healthcare artificial intelligence. However, the requirement of expert annotation by conventional algorithm development processes creates a…
Extracting relations from scientific literature is a fundamental task in biomedical NLP because entities and relations among them drive hypothesis generation and knowledge discovery. As literature grows rapidly, relation extraction (RE) is…
Automatic relationship extraction (RE) from biomedical literature is critical for managing the vast amount of scientific knowledge produced each year. In recent years, utilizing pre-trained language models (PLMs) has become the prevalent…
Relation extraction is a critical task in the field of natural language processing with numerous real-world applications. Existing research primarily focuses on monolingual relation extraction or cross-lingual enhancement for relation…
Relation Extraction (RE) is a foundational task of natural language processing. RE seeks to transform raw, unstructured text into structured knowledge by identifying relational information between entity pairs found in text. RE has numerous…
Over the last five years, research on Relation Extraction (RE) witnessed extensive progress with many new dataset releases. At the same time, setup clarity has decreased, contributing to increased difficulty of reliable empirical evaluation…
Relation Extraction (RE) is a pivotal task in automatically extracting structured information from unstructured text. In this paper, we present a multi-faceted approach that integrates representative examples and through co-set expansion.…
Relation Extraction (RE) is the task of extracting semantic relationships between entities in a sentence and aligning them to relations defined in a vocabulary, which is generally in the form of a Knowledge Graph (KG) or an ontology.…
This comprehensive survey delves into the latest advancements in Relation Extraction (RE), a pivotal task in natural language processing essential for applications across biomedical, financial, and legal sectors. This study highlights the…
Multiple entities in a document generally exhibit complex inter-sentence relations, and cannot be well handled by existing relation extraction (RE) methods that typically focus on extracting intra-sentence relations for single entity pairs.…
State-of-the-art models for relation extraction (RE) in the biomedical domain consider finetuning BioBERT using classification, but they may suffer from the anisotropy problem. Contrastive learning methods can reduce this anisotropy…