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Blood flow reconstruction in the vasculature is important for many clinical applications. However, in clinical settings, the available data are often quite limited. For instance, Transcranial Doppler ultrasound (TCD) is a noninvasive…

Image and Video Processing · Electrical Eng. & Systems 2024-03-18 Shaghayegh Z. Ashtiani , Mohammad Sarabian , Kaveh Laksari , Hessam Babaee

The integrity of articular cartilage is a crucial aspect in the early diagnosis of osteoarthritis (OA). Many novel MRI techniques have the potential to assess compositional changes of the cartilage extracellular matrix. Among these…

Computer Vision and Pattern Recognition · Computer Science 2019-12-05 Alejandra Duarte , Chaitra V. Hegde , Aakash Kaku , Sreyas Mohan , José G. Raya

Magnetic Resonance Imaging (MRI), including diffusion MRI (dMRI), serves as a ``microscope'' for anatomical structures and routinely mitigates the influence of low signal-to-noise ratio scans by compromising temporal or spatial resolution.…

Image and Video Processing · Electrical Eng. & Systems 2025-03-11 Chenxu Wu , Qingpeng Kong , Zihang Jiang , S. Kevin Zhou

Anatomically guided PET reconstruction using MRI information has been shown to have the potential to improve PET image quality. However, these improvements are limited to PET scans with paired MRI information. In this work we employed a…

Image and Video Processing · Electrical Eng. & Systems 2024-03-28 Weijie Gan , Huidong Xie , Carl von Gall , Günther Platsch , Michael T. Jurkiewicz , Andrea Andrade , Udunna C. Anazodo , Ulugbek S. Kamilov , Hongyu An , Jorge Cabello

Interactions between the brain and body are of fundamental importance for human behavior and health. Functional magnetic resonance imaging (fMRI) captures whole-brain activity noninvasively, and modeling how fMRI signals interact with…

Bone fragility and fracture caused by osteoporosis or injury are prevalent in adults over the age of 50 and can reduce their quality of life. Hence, predicting the biomechanical bone strength, specifically of the proximal femur, through…

Image and Video Processing · Electrical Eng. & Systems 2020-04-03 Titas De

Purpose: To accelerate MRI acquisition by incorporating the previous scans of a subject during reconstruction. Although longitudinal imaging constitutes much of clinical MRI, leveraging previous scans is challenging due to the complex…

Image and Video Processing · Electrical Eng. & Systems 2025-10-21 Yonatan Urman , Zachary Shah , Ashwin Kumar , Bruno P. Soares , Kawin Setsompop

B-mode ultrasound is commonly used to image musculoskeletal tissues, but one major bottleneck is data interpretation, and analyses of muscle thickness, pennation angle and fascicle length are often still performed manually. In this study we…

Image and Video Processing · Electrical Eng. & Systems 2020-09-11 Neil J. Cronin , Taija Finni , Olivier Seynnes

The latest advances in computer-assisted precision medicine are making it feasible to move from population-wide models that are useful to discover aggregate patterns that hold for group-based analysis to patient-specific models that can…

Computer Vision and Pattern Recognition · Computer Science 2021-07-28 Da Ma , Vincent Chow , Karteek Popuri , Mirza Faisal Beg

The purpose of this study was to report numerical validation of a 3D finite element model of contracting muscle. The model was based on continuum theory for fibre-reinforced composite materials. Here we simulated contractions for an…

Quantitative Methods · Quantitative Biology 2015-04-03 Hadi Rahemi , Nilima Nigam , James M. Wakeling

We provide a definition and explicit expressions for $n$-body Gaussian Process (GP) kernels which can learn any interatomic interaction occurring in a physical system, up to $n$-body contributions, for any value of $n$. The series is…

Computational Physics · Physics 2018-05-30 Aldo Glielmo , Claudio Zeni , Alessandro De Vita

Medical image segmentation plays a pivotal role in disease diagnosis and treatment planning, particularly in resource-constrained clinical settings where lightweight and generalizable models are urgently needed. However, existing…

Computer Vision and Pattern Recognition · Computer Science 2026-02-10 Chengqi Dong , Fenghe Tang , Rongge Mao , Xinpei Gao , S. Kevin Zhou

This work presents a Gaussian Process (GP) modeling method to predict statistical characteristics of injury kinematics responses using Human Body Models (HBM) more accurately and efficiently. We validate the GHBMC model against a 50\%tile…

Applications · Statistics 2025-04-04 Changmin Baek , Junik Cho , Dongjin Lee

High-fidelity personalized human musculoskeletal models are crucial for simulating realistic behavior of physically coupled human-robot interactive systems and verifying their safety-critical applications in simulations before actual…

Robotics · Computer Science 2025-08-20 Yingfan Zhou , Philip Sanderink , Sigurd Jager Lemming , Cheng Fang

Manual measurement of muscle morphology from ultrasound during speech is time-consuming and limits large-scale studies. We present SMMA, a fully automated framework that combines deep-learning segmentation with skeleton-based thickness…

Quantitative Methods · Quantitative Biology 2026-03-05 Alisher Myrgyyassov , Bruce Xiao Wang , Yu Sun , Shuming Huang , Zhen Song , Min Ney Wong , Yongping Zheng

Understanding structure-property relations is essential to optimally design materials for specific applications. Two-scale simulations are often employed to analyze the effect of the microstructure on a component's macroscopic properties.…

Computational Engineering, Finance, and Science · Computer Science 2022-10-25 Theron Guo , Francesco A. B. Silva , Ondřej Rokoš , Karen Veroy

Case vs control comparisons have been the classical approach to the study of neurological diseases. However, most patients will not fall cleanly into either group. Instead, clinicians will typically find patients that cannot be classified…

Machine Learning · Statistics 2012-07-20 Iead Rezek , Christian Beckmann

We propose a 3D neural network with specific loss functions for quantitative computed tomography (QCT) noise reduction to compute micro-structural parameters such as tissue mineral density (TMD) and bone volume ratio (BV/TV) with…

Image and Video Processing · Electrical Eng. & Systems 2020-11-11 Felix Thomsen , José M. Fuertes García , Manuel Lucena , Juan Pisula , Rodrigo de Luis García , Jan Broggrefe , Claudio Delrieux

Diffusion-weighted magnetic resonance imaging (DW-MRI) is a critical imaging method for capturing and modeling tissue microarchitecture at a millimeter scale. A common practice to model the measured DW-MRI signal is via fiber orientation…

In this paper, we study the problem of learning multi-dimensional Gaussian Mixture Models (GMMs), with a specific focus on model order selection and efficient mixing distribution estimation. We first establish an information-theoretic lower…

Machine Learning · Statistics 2026-03-23 Xinyu Liu , Hai Zhang