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Hierarchical clustering is a critical task in numerous domains. Many approaches are based on heuristics and the properties of the resulting clusterings are studied post hoc. However, in several applications, there is a natural cost function…

We propose a nearest neighbor based clustering algorithm that results in a naturally defined hierarchy of clusters. In contrast to the agglomerative and divisive hierarchical clustering algorithms, our approach is not dependent on the…

Data Structures and Algorithms · Computer Science 2022-03-16 Kaan Gokcesu , Hakan Gokcesu

Hierarchical Clustering is an unsupervised data analysis method which has been widely used for decades. Despite its popularity, it had an underdeveloped analytical foundation and to address this, Dasgupta recently introduced an optimization…

Data Structures and Algorithms · Computer Science 2019-12-17 Sara Ahmadian , Vaggos Chatziafratis , Alessandro Epasto , Euiwoong Lee , Mohammad Mahdian , Konstantin Makarychev , Grigory Yaroslavtsev

We study the cost function for hierarchical clusterings introduced by [arXiv:1510.05043] where hierarchies are treated as first-class objects rather than deriving their cost from projections into flat clusters. It was also shown in…

Machine Learning · Computer Science 2016-10-31 Aurko Roy , Sebastian Pokutta

Given all pairwise weights (distances) among a set of objects, filtered graphs provide a sparse representation by only keeping an important subset of weights. Such graphs can be passed to graph clustering algorithms to generate hierarchical…

Distributed, Parallel, and Cluster Computing · Computer Science 2023-03-10 Shangdi Yu , Julian Shun

Hierarchical Clustering is a popular unsupervised machine learning method with decades of history and numerous applications. We initiate the study of differentially private approximation algorithms for hierarchical clustering under the…

Machine Learning · Computer Science 2023-05-25 Jacob Imola , Alessandro Epasto , Mohammad Mahdian , Vincent Cohen-Addad , Vahab Mirrokni

Hierarchical Clustering trees have been widely accepted as a useful form of clustering data, resulting in a prevalence of adopting fields including phylogenetics, image analysis, bioinformatics and more. Recently, Dasgupta (STOC 16')…

Data Structures and Algorithms · Computer Science 2020-06-04 Noga Alon , Yossi Azar , Danny Vainstein

We survey agglomerative hierarchical clustering algorithms and discuss efficient implementations that are available in R and other software environments. We look at hierarchical self-organizing maps, and mixture models. We review grid-based…

Information Retrieval · Computer Science 2011-05-03 Fionn Murtagh , Pedro Contreras

Filtered graphs provide a powerful tool for data clustering. The triangular maximally filtered graph (TMFG) method, when combined with the directed bubble hierarchy tree (DBHT) method, defines a useful algorithm for hierarchical data…

Distributed, Parallel, and Cluster Computing · Computer Science 2024-08-20 Steven Raphael , Julian Shun

We give an efficient algorithm for Centroid-Linkage Hierarchical Agglomerative Clustering (HAC), which computes a $c$-approximate clustering in roughly $n^{1+O(1/c^2)}$ time. We obtain our result by combining a new Centroid-Linkage HAC…

Data Structures and Algorithms · Computer Science 2024-06-10 MohammadHossein Bateni , Laxman Dhulipala , Willem Fletcher , Kishen N Gowda , D Ellis Hershkowitz , Rajesh Jayaram , Jakub Łącki

Hierarchical clustering is a popular unsupervised data analysis method. For many real-world applications, we would like to exploit prior information about the data that imposes constraints on the clustering hierarchy, and is not captured by…

Data Structures and Algorithms · Computer Science 2018-07-17 Vaggos Chatziafratis , Rad Niazadeh , Moses Charikar

Advances in sensing technologies and the growth of the internet have resulted in an explosion in the size of modern datasets, while storage and processing power continue to lag behind. This motivates the need for algorithms that are…

Machine Learning · Computer Science 2012-06-22 Akshay Krishnamurthy , Sivaraman Balakrishnan , Min Xu , Aarti Singh

We introduce TeraHAC, a $(1+\epsilon)$-approximate hierarchical agglomerative clustering (HAC) algorithm which scales to trillion-edge graphs. Our algorithm is based on a new approach to computing $(1+\epsilon)$-approximate HAC, which is a…

Data Structures and Algorithms · Computer Science 2024-06-12 Laxman Dhulipala , Jason Lee , Jakub Łącki , Vahab Mirrokni

We present a novel hierarchical graph clustering algorithm inspired by modularity-based clustering techniques. The algorithm is agglomerative and based on a simple distance between clusters induced by the probability of sampling node pairs.…

Social and Information Networks · Computer Science 2018-06-25 Thomas Bonald , Bertrand Charpentier , Alexis Galland , Alexandre Hollocou

In this paper, we reduce the complexity of approximating the correlation clustering problem from $O(m\times\left( 2+ \alpha (G) \right)+n)$ to $O(m+n)$ for any given value of $\varepsilon$ for a complete signed graph with $n$ vertices and…

Data Structures and Algorithms · Computer Science 2025-06-03 Ali Shakiba

Hierarchical clustering remains a fundamental challenge in data mining, particularly when dealing with large-scale datasets where traditional approaches fail to scale effectively. Recent Chameleon-based algorithms - Chameleon2, M-Chameleon,…

Machine Learning · Computer Science 2025-10-07 Priyanshu Singh , Kapil Ahuja

Comparison-based learning addresses the problem of learning when, instead of explicit features or pairwise similarities, one only has access to comparisons of the form: \emph{Object $A$ is more similar to $B$ than to $C$.} Recently, it has…

Machine Learning · Computer Science 2023-04-04 Aishik Mandal , Michaël Perrot , Debarghya Ghoshdastidar

One of the main challenges for hierarchical clustering is how to appropriately identify the representative points in the lower level of the cluster tree, which are going to be utilized as the roots in the higher level of the cluster tree…

Machine Learning · Statistics 2021-11-16 Wen-Bo Xie , Zhen Liu , Jaideep Srivastava

HDBSCAN*, a state-of-the-art density-based hierarchical clustering method, produces a hierarchical organization of clusters in a dataset w.r.t. a parameter mpts. While the performance of HDBSCAN* is robust w.r.t. mpts in the sense that a…

We study the design of local algorithms for massive graphs. A local algorithm is one that finds a solution containing or near a given vertex without looking at the whole graph. We present a local clustering algorithm. Our algorithm finds a…

Data Structures and Algorithms · Computer Science 2008-09-19 Daniel A. Spielman , Shang-Hua Teng