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Future experiments in high-energy physics will pose stringent requirements to computing, in particular to real-time data processing. As an example, the CBM experiment at FAIR Germany intends to perform online data selection exclusively in…

Computational Physics · Physics 2020-02-06 V. Singhal , S. Chattopadhyay , V. Friese

Scaling up hardware systems has become an important tactic for improving performance as Moore's law fades. Unfortunately, simulations of large hardware systems are often a design bottleneck due to slow throughput and long build times. In…

Distributed, Parallel, and Cluster Computing · Computer Science 2024-07-31 Steven Herbst , Noah Moroze , Edgar Iglesias , Andreas Olofsson

We propose a high-performance GPU solver for inverse homogenization problems to design high-resolution 3D microstructures. Central to our solver is a favorable combination of data structures and algorithms, making full use of the parallel…

Optimization and Control · Mathematics 2023-05-26 Di Zhang , Xiaoya Zhai , Ligang Liu , Xiao-Ming Fu

We present MuMax, a general-purpose micromagnetic simulation tool running on Graphical Processing Units (GPUs). MuMax is designed for high performance computations and specifically targets large simulations. In that case speedups of over a…

Computational Physics · Physics 2015-05-27 Arne Vansteenkiste , Ben Van de Wiele

A modern graphics processing unit (GPU) is able to perform massively parallel scientific computations at low cost. We extend our implementation of the checkerboard algorithm for the two dimensional Ising model [T. Preis et al., J. Comp.…

Computational Physics · Physics 2010-07-22 Benjamin Block , Peter Virnau , Tobias Preis

Image analysis using more than one modality (i.e. multi-modal) has been increasingly applied in the field of biomedical imaging. One of the challenges in performing the multimodal analysis is that there exist multiple schemes for fusing the…

Computer Vision and Pattern Recognition · Computer Science 2018-06-19 Zhe Guo , Xiang Li , Heng Huang , Ning Guo , Quanzheng Li

We introduce a particle-based simulation method for granular material in interactive frame rates. We divide the simulation into two decoupled steps. In the first step, a relatively small number of particles is accurately simulated with a…

Graphics · Computer Science 2023-08-04 Alexander Sommer , Ulrich Schwanecke , Elmar Schömer

Modern GPU systems are constantly evolving to meet the needs of computing-intensive applications in scientific and machine learning domains. However, there is typically a gap between the hardware capacity and the achievable application…

Distributed, Parallel, and Cluster Computing · Computer Science 2024-10-02 Gabin Schieffer , Ruimin Shi , Stefano Markidis , Andreas Herten , Jennifer Faj , Ivy Peng

Hardware-aware design and optimization is crucial in exploiting emerging architectures for PDE-based computational fluid dynamics applications. In this work, we study optimizations aimed at acceleration of OpenFOAM-based applications on…

Distributed, Parallel, and Cluster Computing · Computer Science 2015-05-29 Amani AlOnazi , David Keyes , Alexey Lastovetsky , Vladimir Rychkov

Developments in metamaterials and related structures such as metasurfaces have opened up new possibilities in designing materials and devices with unique properties. The main progress related to electromagnetic waves applications was done…

Medical Physics · Physics 2016-12-13 Rita Schmidt , Alexey Slobozhanyuk , Pavel Belov , Andrew Webb

Large scale graph optimization problems arise in many fields. This paper presents an extensible, high performance framework (named OpenGraphGym-MG) that uses deep reinforcement learning and graph embedding to solve large graph optimization…

Distributed, Parallel, and Cluster Computing · Computer Science 2021-06-25 Weijian Zheng , Dali Wang , Fengguang Song

Training large language models (LLMs) is a computationally intensive task, which is typically conducted in data centers with homogeneous high-performance GPUs. In this paper, we explore an alternative approach by deploying training…

Distributed, Parallel, and Cluster Computing · Computer Science 2026-05-14 Ran Yan , Youhe Jiang , Xiaonan Nie , Fangcheng Fu , Bin Cui , Binhang Yuan

The emerging demand for advanced structural and biological materials calls for novel modeling tools that can rapidly yield high-fidelity estimation on materials properties in design cycles. Lattice spring model (LSM), a coarse-grained…

Materials Science · Physics 2022-02-28 Yuan Chiang , Ting-Wai Chiu , Shu-Wei Chang

Microcontroller units (MCUs) are widely used in embedded devices due to their low power consumption and cost-effectiveness. MCU firmware controls these devices and is vital to the security of embedded systems. However, performing dynamic…

Cryptography and Security · Computer Science 2025-09-10 Chongqing Lei , Zhen Ling , Xiangyu Xu , Shaofeng Li , Guangchi Liu , Kai Dong , Junzhou Luo

We present a GPU implementation of LAMMPS, a widely-used parallel molecular dynamics (MD) software package, and show 5x to 13x single node speedups versus the CPU-only version of LAMMPS. This new CUDA package for LAMMPS also enables…

Materials Science · Physics 2011-03-08 Christian R. Trott , Lars Winterfeld , Paul S. Crozier

Accurate numerical simulations of interaction between fluid and solid play an important role in applications. The task is challenging in practical scenarios as the media are usually highly heterogeneous with very large contrast. To overcome…

Numerical Analysis · Mathematics 2020-05-15 Xia Wang , Eric Chung , Shubin Fu , Zhaoqin Huang

High-throughput imaging workflows, such as Parallel Rapid Imaging with Spectroscopic Mapping (PRISM), generate data at rates that exceed conventional real-time processing capabilities. We present a scalable FPGA-based preprocessing pipeline…

Hardware Architecture · Computer Science 2025-11-26 Weichien Liao

Materials exhibit geometric structures across mesoscopic to microscopic scales, influencing macroscale properties such as appearance, mechanical strength, and thermal behavior. Capturing and modeling these multiscale structures is…

Graphics · Computer Science 2025-04-15 Bojja Venu , Adam Bosak , Juan Raul Padron-Griffe

Fluid-structure interaction (FSI) simulation of biological systems presents significant computational challenges, particularly for applications involving large structural deformations and contact mechanics, such as heart valve dynamics.…

Quantitative Methods · Quantitative Biology 2026-02-13 Ryan T. Black , Steve A. Maas , Wensi Wu , Jalaj Maheshwari , Tzanio Kolev , Jeffrey A. Weiss , Matthew A. Jolley

Differentiable programming has emerged as a powerful paradigm in scientific computing, enabling automatic differentiation through simulation pipelines and naturally supporting both forward and inverse modeling. We present JAX-MPM, a…

Machine Learning · Computer Science 2025-09-30 Honghui Du , QiZhi He
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