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Comparative analyses of phylogenetic trees typically require identical taxon sets, however, in practice, trees often include distinct but overlapping taxa. Pruning non-shared leaves discards phylogenetic signal, whereas tree completion can…

Populations and Evolution · Quantitative Biology 2026-04-28 Aleksandr Koshkarov , Nadia Tahiri

We study the problem of privately releasing an approximate minimum spanning tree (MST). Given a graph $G = (V, E, \vec{W})$ where $V$ is a set of $n$ vertices, $E$ is a set of $m$ undirected edges, and $ \vec{W} \in \mathbb{R}^{|E|} $ is an…

Data Structures and Algorithms · Computer Science 2024-12-16 Rasmus Pagh , Lukas Retschmeier , Hao Wu , Hanwen Zhang

The local tree-width of a graph G=(V,E) is the function ltw^G: N -> N that associates with every natural number r the maximal tree-width of an r-neighborhood in G. Our main graph theoretic result is a decomposition theorem for graphs with…

Combinatorics · Mathematics 2007-05-23 Martin Grohe

We study the generalized minimum Manhattan network (GMMN) problem: given a set $P$ of pairs of two points in the Euclidean plane $\mathbb{R}^2$, we are required to find a minimum-length geometric network which consists of axis-aligned…

Data Structures and Algorithms · Computer Science 2020-04-28 Yuya Masumura , Taihei Oki , Yutaro Yamaguchi

This study examines a resource-sharing problem involving multiple parties that agree to use a set of capacities together. We start with modeling the whole problem as a mathematical program, where all parties are required to exchange…

Optimization and Control · Mathematics 2024-01-08 Utku Karaca , Nursen Aydin , Sinan Yildirim , S. Ilker Birbil

Given a directed graph $G$ on $n$ vertices with a special vertex $s$, the directed minimum degree spanning tree problem requires computing a incoming spanning tree rooted at $s$ whose maximum tree in-degree is the smallest among all such…

Data Structures and Algorithms · Computer Science 2019-05-28 Ran Duan , Tianyi Zhang

Fomin and Villanger (STACS 2010) proved that Maximum Independent Set, Feedback Vertex Set, and more generally the problem of finding a maximum induced subgraph of treewith at most a constant $t$, can be solved in polynomial time on graph…

Data Structures and Algorithms · Computer Science 2016-07-18 Pedro Montealegre , Ioan Todinca

This paper give a simple linear-time algorithm that, given a weighted digraph, finds a spanning tree that simultaneously approximates a shortest-path tree and a minimum spanning tree. The algorithm provides a continuous trade-off: given the…

Data Structures and Algorithms · Computer Science 2015-06-02 Samir Khuller , Balaji Raghavachari , Neal E. Young

We study the problem of releasing a differentially private (DP) synthetic graph $G'$ that well approximates the triangle-motif sizes of all cuts of any given graph $G$, where a motif in general refers to a frequently occurring subgraph…

Data Structures and Algorithms · Computer Science 2025-09-23 Pan Peng , Hangyu Xu

The popularity of federated learning comes from the possibility of better scalability and the ability for participants to keep control of their data, improving data security and sovereignty. Unfortunately, sharing model updates also creates…

Machine Learning · Computer Science 2024-06-05 Edwige Cyffers , Aurélien Bellet , Jalaj Upadhyay

This paper proposes a differentially private gradient-tracking-based distributed stochastic optimization algorithm over directed graphs. In particular, privacy noises are incorporated into each agent's state and tracking variable to…

Systems and Control · Electrical Eng. & Systems 2026-04-15 Jialong Chen , Jimin Wang , Ji-Feng Zhang

We study the Densest Subgraph (DSG) problem under the additional constraint of differential privacy. DSG is a fundamental theoretical question which plays a central role in graph analytics, and so privacy is a natural requirement. All known…

Data Structures and Algorithms · Computer Science 2024-04-09 Michael Dinitz , Satyen Kale , Silvio Lattanzi , Sergei Vassilvitskii

Differentially private algorithms allow large-scale data analytics while preserving user privacy. Designing such algorithms for graph data is gaining importance with the growth of large networks that model various (sensitive) relationships…

Data Structures and Algorithms · Computer Science 2022-11-22 Laxman Dhulipala , Quanquan C. Liu , Sofya Raskhodnikova , Jessica Shi , Julian Shun , Shangdi Yu

Discovering frequent graph patterns in a graph database offers valuable information in a variety of applications. However, if the graph dataset contains sensitive data of individuals such as mobile phone-call graphs and web-click graphs,…

Databases · Computer Science 2013-03-05 Entong Shen , Ting Yu

The problem of finding multiple simple shortest paths in a weighted directed graph $G=(V,E)$ has many applications, and is considerably more difficult than the corresponding problem when cycles are allowed in the paths. Even for a single…

Data Structures and Algorithms · Computer Science 2016-02-24 Udit Agarwal , Vijaya Ramachandran

We show that for a number of parameterized problems for which only $2^{O(k)} n^{O(1)}$ time algorithms are known on general graphs, subexponential parameterized algorithms with running time $2^{O(k^{1-\frac{1}{1+\delta}} \log^2 k)}…

Data Structures and Algorithms · Computer Science 2016-10-26 Dániel Marx , Marcin Pilipczuk

Deep learning models are known to put the privacy of their training data at risk, which poses challenges for their safe and ethical release to the public. Differentially private stochastic gradient descent is the de facto standard for…

Machine Learning · Computer Science 2023-01-03 Morgane Ayle , Jan Schuchardt , Lukas Gosch , Daniel Zügner , Stephan Günnemann

Given a metric space on n points, an {\alpha}-approximate universal algorithm for the Steiner tree problem outputs a distribution over rooted spanning trees such that for any subset X of vertices containing the root, the expected cost of…

Data Structures and Algorithms · Computer Science 2010-11-18 Anand Bhalgat , Deeparnab Chakrabarty , Sanjeev Khanna

An L(2,1)-labeling of a graph $G$ is an assignment $f$ from the vertex set $V(G)$ to the set of nonnegative integers such that $|f(x)-f(y)|\ge 2$ if $x$ and $y$ are adjacent and $|f(x)-f(y)|\ge 1$ if $x$ and $y$ are at distance 2, for all…

Data Structures and Algorithms · Computer Science 2010-11-25 Toru Hasunuma , Toshimasa Ishii , Hirotaka Ono , Yushi Uno

In this work we study the interleaving distance between merge trees from a combinatorial point of view. We use a particular type of matching between trees to obtain a novel formulation of the distance. With such formulation, we tackle the…

Combinatorics · Mathematics 2024-11-11 Matteo Pegoraro
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