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Recent years have witnessed a surge of biological interest in the minimum spanning tree (MST) problem for its relevance to automatic model construction using the distances between data points. Despite the increasing use of MST algorithms…

Quantitative Methods · Quantitative Biology 2015-11-02 Momoko Hayamizu , Hiroshi Endo , Kenji Fukumizu

LRM-Trees are an elegant way to partition a sequence of values into sorted consecutive blocks, and to express the relative position of the first element of each block within a previous block. They were used to encode ordinal trees and to…

Data Structures and Algorithms · Computer Science 2010-09-30 Jérémy Barbay , Johannes Fischer

It is common that entity mentions can contain other mentions recursively. This paper introduces a scalable transition-based method to model the nested structure of mentions. We first map a sentence with nested mentions to a designated…

Computation and Language · Computer Science 2018-10-04 Bailin Wang , Wei Lu , Yu Wang , Hongxia Jin

Index structures are one of the most important tools that DBAs leverage to improve the performance of analytics and transactional workloads. However, building several indexes over large datasets can often become prohibitive and consume…

Databases · Computer Science 2020-03-26 Alex Galakatos , Michael Markovitch , Carsten Binnig , Rodrigo Fonseca , Tim Kraska

In this paper we introduce the notion of explicit worst-case bounded adaptive algorithms for applications with fixed process-completion requirements. Such applications demand that a process be guaranteed to complete within an established…

Data Structures and Algorithms · Computer Science 2022-07-19 Haley Massa , Jeffrey Uhlmann

In the present study it is shown that significant impacts on forests can lead to large climate fluctuations at global level. This research takes into account various scenarios for the reconstruction of forest areas using the geo-ecological…

Atmospheric and Oceanic Physics · Physics 2017-09-26 Costas A. Varotsos , Vladimir F. Krapivin

This paper proposes a stable sparse rapidly-exploring random trees (SST) algorithm to solve the optimal motion planning problem for hybrid systems. At each iteration, the proposed algorithm, called HySST, selects a vertex with the lowest…

Robotics · Computer Science 2023-05-31 Nan Wang , Ricardo G. Sanfelice

Steiner Tree Packing (STP) is a notoriously hard problem in classical complexity theory, which is of practical relevance to VLSI circuit design. Previous research has approached this problem by providing heuristic or approximate algorithms.…

Data Structures and Algorithms · Computer Science 2025-05-15 Niko Hastrich , Kirill Simonov

Probabilistic programming languages and other machine learning applications often require samples to be generated from a categorical distribution where the probability of each one of $n$ categories is specified as a parameter. If the…

Data Structures and Algorithms · Computer Science 2019-06-28 Daniel Tang

We initiate the study of tree structures in the context of scenario-based robust optimization. Specifically, we study Binary Search Trees (BSTs) and Huffman coding, two fundamental techniques for efficiently managing and encoding data based…

Data Structures and Algorithms · Computer Science 2024-08-22 Spyros Angelopoulos , Christoph Dürr , Alex Elenter , Georgii Melidi

We give the first data structure for the problem of maintaining a dynamic set of n elements drawn from a partially ordered universe described by a tree. We define the Line-Leaf Tree, a linear-sized data structure that supports the…

Data Structures and Algorithms · Computer Science 2011-05-03 Brent Heeringa , Marius Catalin Iordan , Louis Theran

The dynamic trees problem is to maintain a tree under edge updates while supporting queries like connectivity queries or path queries. Despite the first data structure for this fundamental problem -- the link-cut tree -- being invented 40…

Data Structures and Algorithms · Computer Science 2026-01-16 Quinten De Man , Atharva Sharma , Kishen N Gowda , Laxman Dhulipala

We address the problem of building and maintaining distributed spanning trees in highly dynamic networks, in which topological events can occur at any time and any rate, and no stable periods can be assumed. In these harsh environments, we…

Distributed, Parallel, and Cluster Computing · Computer Science 2013-07-23 Arnaud Casteigts , Serge Chaumette , Frédéric Guinand , Yoann Pigné

We give an algorithm to enumerate the results on trees of monadic second-order (MSO) queries represented by nondeterministic tree automata. After linear time preprocessing (in the input tree), we can enumerate answers with linear delay (in…

Databases · Computer Science 2019-08-28 Antoine Amarilli , Pierre Bourhis , Stefan Mengel , Matthias Niewerth

Survival analysis of right censored data arises often in many areas of research including medical research. Effect of covariates (and their interactions) on survival distribution can be studied through existing methods which requires to…

Methodology · Statistics 2021-08-11 Madan Gopal Kundu , Samiran Ghosh

Baswana, Gupta and Sen [FOCS'11] showed that fully dynamic maximal matching can be maintained in general graphs with logarithmic amortized update time. More specifically, starting from an empty graph on $n$ fixed vertices, they devised a…

Data Structures and Algorithms · Computer Science 2016-04-29 Shay Solomon

In the past decade, there has been a systematic investigation of symmetry-protected topological (SPT) phases in interacting fermion systems. Specifically, by utilizing the concept of equivalence classes of finite-depth fermionic symmetric…

Strongly Correlated Electrons · Physics 2025-11-18 Xing-Yu Ren , Shang-Qiang Ning , Yang Qi , Qing-Rui Wang , Zheng-Cheng Gu

The Euclidean Steiner tree problem asks to find a min-cost metric graph that connects a given set of \emph{terminal} points $X$ in $\mathbb{R}^d$, possibly using points not in $X$ which are called Steiner points. Even though near-linear…

Computational Geometry · Computer Science 2023-12-01 T-H. Hubert Chan , Gramoz Goranci , Shaofeng H. -C. Jiang , Bo Wang , Quan Xue

This paper presents a detailed comparison of a recently proposed algorithm for optimizing decision trees, tree alternating optimization (TAO), with other popular, established algorithms. We compare their performance on a number of…

Machine Learning · Computer Science 2020-03-23 Arman Zharmagambetov , Suryabhan Singh Hada , Miguel Á. Carreira-Perpiñán , Magzhan Gabidolla

Decision Trees have remained a popular machine learning method for tabular datasets, mainly due to their interpretability. However, they lack the expressiveness needed to handle highly nonlinear or unstructured datasets. Motivated by recent…

Machine Learning · Computer Science 2024-10-30 Dimitris Bertsimas , Lisa Everest , Jiayi Gu , Matthew Peroni , Vasiliki Stoumpou