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The Gene Ontology (GO) provides biologists with a controlled terminology that describes how genes are associated with functions and how functional terms are related to each other. These term-term relationships encode how scientists conceive…

Quantitative Methods · Quantitative Biology 2013-05-07 Kimberly Glass , Michelle Girvan

Artificial Intelligence has looked into biological systems as a source of inspiration. Although there are many aspects of the brain yet to be discovered, neuroscience has found evidence that the connections between neurons continuously grow…

Neural and Evolutionary Computing · Computer Science 2020-10-29 Javier Lopez Randulfe , Leon Bonde Larsen

Recent work suggests goal-driven training of neural networks can be used to model neural activity in the brain. While response properties of neurons in artificial neural networks bear similarities to those in the brain, the network…

Neurons and Cognition · Quantitative Biology 2020-05-19 Christopher J. Cueva , Peter Y. Wang , Matthew Chin , Xue-Xin Wei

Human reasoning can often be understood as an interplay between two systems: the intuitive and associative ("System 1") and the deliberative and logical ("System 2"). Neural sequence models -- which have been increasingly successful at…

Artificial Intelligence · Computer Science 2021-12-16 Maxwell Nye , Michael Henry Tessler , Joshua B. Tenenbaum , Brenden M. Lake

Identifying the spatio-temporal network structure of brain activity from multi-neuronal data streams is one of the biggest challenges in neuroscience. Repeating patterns of precisely timed activity across a group of neurons is potentially…

Neurons and Cognition · Quantitative Biology 2009-03-03 Casey Diekman , Kohinoor Dasgupta , Vijay Nair , P. S. Sastry , K. P. Unnikrishnan

We can define a neural network that can learn to recognize objects in less than 100 lines of code. However, after training, it is characterized by millions of weights that contain the knowledge about many object types across visual scenes.…

Machine Learning · Computer Science 2019-07-16 Timothy P. Lillicrap , Konrad P. Kording

The approximation capability of ANNs and their RNN instantiations, is strongly correlated with the number of parameters packed into these networks. However, the complexity barrier for human understanding, is arguably related to the number…

Neural and Evolutionary Computing · Computer Science 2023-03-10 Julian Lemmel , Radu Grosu

Optical neural networks have long cast attention nowadays. Like other optical structured neural networks, fiber neural networks which utilize the mechanism of light transmission to compute can take great advantages in both computing…

Signal Processing · Electrical Eng. & Systems 2024-08-26 Yubin Zang , Zuxing Zhang , Simin Li , Fangzheng Zhang , Hongwei Chen

Recent developments in experimental neuroscience make it possible to simultaneously record the activity of thousands of neurons. However, the development of analysis approaches for such large-scale neural recordings have been slower than…

Neurons and Cognition · Quantitative Biology 2022-10-18 Rufus Mitchell-Heggs , Seigfred Prado , Giuseppe P. Gava , Mary Ann Go , Simon R. Schultz

Natural language processing for programming aims to use NLP techniques to assist programming. It is increasingly prevalent for its effectiveness in improving productivity. Distinct from natural language, a programming language is highly…

Computation and Language · Computer Science 2023-08-08 Qingfu Zhu , Xianzhen Luo , Fang Liu , Cuiyun Gao , Wanxiang Che

The brain is a remarkably capable and efficient system. It can process and store huge amounts of noisy and unstructured information using minimal energy. In contrast, current artificial intelligence (AI) systems require vast resources for…

Neural and Evolutionary Computing · Computer Science 2023-06-16 Michalis Pagkalos , Roman Makarov , Panayiota Poirazi

Networked systems display complex patterns of interactions between a large number of components. In physical networks, these interactions often occur along structural connections that link components in a hard-wired connection topology,…

Neurons and Cognition · Quantitative Biology 2018-04-03 Jason Kim , Jonathan M. Soffer , Ari E. Kahn , Jean M. Vettel , Fabio Pasqualetti , Danielle S. Bassett

Much of the information processing performed by a neuron occurs in the dendritic tree. For neural systems using light for communication, it is advantageous to convert signals to the electronic domain at synaptic terminals so dendritic…

Neural and Evolutionary Computing · Computer Science 2019-04-08 Jeffrey M. Shainline

This paper describes a relatively simple way of allowing a brain model to self-organise its concept patterns through nested structures. For a simulation, time reduction is helpful and it would be able to show how patterns may form and then…

Artificial Intelligence · Computer Science 2015-03-17 Kieran Greer

Significant challenges exist globally regarding literacy teaching and learning. To address these challenges, key features of how the brain works should be taken into account. First, perception is an active process based in detection of…

Neurons and Cognition · Quantitative Biology 2021-05-25 George Ellis , Carole Bloch

I think that the main reason why we do not understand the general principles of how knowledge works (and probably also the reason why we have not yet designed and built efficient machines capable of artificial intelligence), is not the…

Artificial Intelligence · Computer Science 2014-04-21 Devis Pantano

Biomedical knowledge graphs permit an integrative computational approach to reasoning about biological systems. The nature of biological data leads to a graph structure that differs from those typically encountered in benchmarking datasets.…

Machine Learning · Computer Science 2021-03-19 Yushan Liu , Marcel Hildebrandt , Mitchell Joblin , Martin Ringsquandl , Rime Raissouni , Volker Tresp

The functioning of an organ such as the brain emerges from interactions between its constituent parts. Further, this interaction is not immutable in time but rather unfolds in a succession of patterns, thereby allowing the brain to adapt to…

Neurons and Cognition · Quantitative Biology 2021-06-02 Emmanuelle Tognoli , Daniela Benites , J. A. Scott Kelso

Neurosymbolic Programming (NP) techniques have the potential to accelerate scientific discovery. These models combine neural and symbolic components to learn complex patterns and representations from data, using high-level concepts or known…

Our understanding of neural computation is founded on the assumption that neurons fire in response to a linear summation of inputs. Yet experiments demonstrate that some neurons are capable of complex functions that require interactions…

Biological Physics · Physics 2026-03-23 Christopher W. Lynn