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Graph neural networks trained to predict observable dynamics can be used to decompose the temporal activity of complex heterogeneous systems into simple, interpretable representations. Here we apply this framework to simulated neural…

Neurons and Cognition · Quantitative Biology 2026-02-17 Cédric Allier , Larissa Heinrich , Magdalena Schneider , Stephan Saalfeld

In recent years, analyzing task-based fMRI (tfMRI) data has become an essential tool for understanding brain function and networks. However, due to the sheer size of tfMRI data, its intrinsic complex structure, and lack of ground truth of…

Distributed, Parallel, and Cluster Computing · Computer Science 2018-03-06 Milad Makkie , Heng Huang , Yu Zhao , Athanasios V. Vasilakos , Tianming Liu

Extracting the latent underlying structures of complex nonlinear local and nonlocal flows is essential for their analysis and modeling. In this work, we attempt to provide a consistent framework through Koopman theory and its related…

Dynamical Systems · Mathematics 2021-12-23 Ido Cohen , Guy Gilboa

Dynamical systems are ubiquitous within science and engineering, from turbulent flow across aircraft wings to structural variability of proteins. Although some systems are well understood and simulated, scientific imaging often confronts…

Computer Vision and Pattern Recognition · Computer Science 2025-09-03 Ali SaraerToosi , Renbo Tu , Kamyar Azizzadenesheli , Aviad Levis

We introduce and implement GraphDD: an efficient method for real-time, circuit-specific, optimal embedding of dynamical decoupling (DD) into executable quantum algorithms. We demonstrate that for an arbitrary quantum circuit, GraphDD…

Quantum Physics · Physics 2025-06-13 Paul Coote , Roman Dimov , Smarak Maity , Gavin S. Hartnett , Michael J. Biercuk , Yuval Baum

The time-dependent fields obtained by solving partial differential equations in two and more dimensions quickly overwhelm the analytical capabilities of the human brain. A meaningful insight into the temporal behaviour can be obtained by…

Numerical Analysis · Mathematics 2024-04-04 Miha Rot , Martin Horvat , Gregor Kosec

We introduce Neural Deformation Graphs for globally-consistent deformation tracking and 3D reconstruction of non-rigid objects. Specifically, we implicitly model a deformation graph via a deep neural network. This neural deformation graph…

Computer Vision and Pattern Recognition · Computer Science 2020-12-04 Aljaž Božič , Pablo Palafox , Michael Zollhöfer , Justus Thies , Angela Dai , Matthias Nießner

Extracting coherent patterns is one of the standard approaches towards understanding spatio-temporal data. Dynamic mode decomposition (DMD) is a powerful tool for extracting coherent patterns, but the original DMD and most of its variants…

Machine Learning · Computer Science 2021-02-22 Naoya Takeishi , Keisuke Fujii , Koh Takeuchi , Yoshinobu Kawahara

Low-rank approximation models of data matrices have become important machine learning and data mining tools in many fields including computer vision, text mining, bioinformatics and many others. They allow for embedding high-dimensional…

Machine Learning · Computer Science 2020-10-19 Penglong Zhai , Shihua Zhang

Dynamic mode decomposition (DMD) gives a practical means of extracting dynamic information from data, in the form of spatial modes and their associated frequencies and growth/decay rates. DMD can be considered as a numerical approximation…

Dynamical Systems · Mathematics 2017-10-03 Hao Zhang , Scott T. M. Dawson , Clarence W. Rowley , Eric A. Deem , Louis N. Cattafesta

Dynamic mode decomposition (DMD) has recently become a popular tool for the non-intrusive analysis of dynamical systems. Exploiting Proper Orthogonal Decomposition (POD) as a dimensionality reduction technique, DMD is able to approximate a…

Numerical Analysis · Mathematics 2024-01-17 Francesco Andreuzzi , Nicola Demo , Gianluigi Rozza

Identifying objective neuroimaging biomarkers to forecast Alzheimer's disease (AD) progression is crucial for timely intervention. However, this task remains challenging due to the complex dysfunctions in the spatio-temporal characteristics…

Dynamic mode decomposition (DMD) is a recently developed tool for the analysis of the behavior of complex dynamical systems. In this paper, we will propose an extension of DMD that exploits low-rank tensor decompositions of potentially…

Numerical Analysis · Mathematics 2019-08-14 Stefan Klus , Patrick Gelß , Sebastian Peitz , Christof Schütte

Surgical workflow recognition is vital for automating tasks, supporting decision-making, and training novice surgeons, ultimately improving patient safety and standardizing procedures. However, data corruption can lead to performance…

Computer Vision and Pattern Recognition · Computer Science 2025-05-06 Long Bai , Boyi Ma , Ruohan Wang , Guankun Wang , Beilei Cui , Zhongliang Jiang , Mobarakol Islam , Zhe Min , Jiewen Lai , Nassir Navab , Hongliang Ren

Traffic prediction is a critical component of intelligent transportation systems, enabling applications such as congestion mitigation and accident risk prediction. While recent research has explored both graph-based and grid-based…

Computer Vision and Pattern Recognition · Computer Science 2025-09-22 Hyeonseok Jin , Geonmin Kim , Kyungbaek Kim

Discrete dislocation dynamics (DDD) is a widely employed computational method to study plasticity at the mesoscale that connects the motion of dislocation lines to the macroscopic response of crystalline materials. However, the…

Materials Science · Physics 2023-05-24 Nicolas Bertin , Fei Zhou

Graph neural networks (GNNs) have been successfully applied to early mild cognitive impairment (EMCI) detection, with the usage of elaborately designed features constructed from blood oxygen level-dependent (BOLD) time series. However, few…

Machine Learning · Computer Science 2022-11-14 Yunpeng Zhao , Fugen Zhou , Bin Guo , Bo Liu

The analysis of non-stationary time-series data requires insight into its local and global patterns with physical interpretability. However, traditional smoothing algorithms, such as B-splines, Savitzky-Golay filtering, and Empirical Mode…

Signal Processing · Electrical Eng. & Systems 2026-02-25 Teymur Aghayev

Generative models like Generative Adversarial Networks (GANs) and Variational Autoencoders (VAEs) often fail to capture the full diversity of their training data, leading to mode collapse. While this issue is well-explored in image…

Machine Learning · Computer Science 2024-12-17 Amime Mohamed Aboussalah , Yassine Abbahaddou

Recent progress in research on Deep Graph Networks (DGNs) has led to a maturation of the domain of learning on graphs. Despite the growth of this research field, there are still important challenges that are yet unsolved. Specifically,…

Machine Learning · Computer Science 2024-04-10 Alessio Gravina , Davide Bacciu
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