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Radiologists are in short supply globally, and deep learning models offer a promising solution to address this shortage as part of clinical decision-support systems. However, training such models often requires expensive and time-consuming…

Computation and Language · Computer Science 2023-07-10 Alessandro Wollek , Philip Haitzer , Thomas Sedlmeyr , Sardi Hyska , Johannes Rueckel , Bastian Sabel , Michael Ingrisch , Tobias Lasser

The extraction of labels from radiology text reports enables large-scale training of medical imaging models. Existing approaches to report labeling typically rely either on sophisticated feature engineering based on medical domain knowledge…

Computation and Language · Computer Science 2020-10-20 Akshay Smit , Saahil Jain , Pranav Rajpurkar , Anuj Pareek , Andrew Y. Ng , Matthew P. Lungren

Obtaining automated preliminary read reports for common exams such as chest X-rays will expedite clinical workflows and improve operational efficiencies in hospitals. However, the quality of reports generated by current automated approaches…

Although deep learning models for chest X-ray interpretation are commonly trained on labels generated by automatic radiology report labelers, the impact of improvements in report labeling on the performance of chest X-ray classification…

Image and Video Processing · Electrical Eng. & Systems 2021-11-30 Saahil Jain , Akshay Smit , Andrew Y. Ng , Pranav Rajpurkar

Free-text radiology reports present a rich data source for various medical tasks, but effectively labeling these texts remains challenging. Traditional rule-based labeling methods fall short of capturing the nuances of diverse free-text…

Computation and Language · Computer Science 2024-11-07 Jawook Gu , Kihyun You , Han-Cheol Cho , Jiho Kim , Eun Kyoung Hong , Byungseok Roh

Decision support tools that rely on supervised learning require large amounts of expert annotations. Using past radiological reports obtained from hospital archiving systems has many advantages as training data above manual single-class…

Machine Learning · Computer Science 2021-05-21 Aydan Gasimova

Automatic extraction of medical conditions from free-text radiology reports is critical for supervising computer vision models to interpret medical images. In this work, we show that radiologists labeling reports significantly disagree with…

Image and Video Processing · Electrical Eng. & Systems 2021-03-16 Saahil Jain , Akshay Smit , Steven QH Truong , Chanh DT Nguyen , Minh-Thanh Huynh , Mudit Jain , Victoria A. Young , Andrew Y. Ng , Matthew P. Lungren , Pranav Rajpurkar

It is often infeasible or impossible to obtain ground truth labels for medical data. To circumvent this, one may build rule-based or other expert-knowledge driven labelers to ingest data and yield silver labels absent any ground-truth…

Machine Learning · Computer Science 2020-06-30 Matthew B. A. McDermott , Tzu Ming Harry Hsu , Wei-Hung Weng , Marzyeh Ghassemi , Peter Szolovits

Multi-label classification of chest X-ray images is frequently performed using discriminative approaches, i.e. learning to map an image directly to its binary labels. Such approaches make it challenging to incorporate auxiliary information…

Artificial Intelligence · Computer Science 2021-03-11 Anjany Sekuboyina , Daniel Oñoro-Rubio , Jens Kleesiek , Brandon Malone

In chest X-ray (CXR) image analysis, rule-based systems are usually employed to extract labels from reports for dataset releases. However, there is still room for improvement in label quality. These labelers typically output only presence…

Image and Video Processing · Electrical Eng. & Systems 2025-06-03 Ricardo Bigolin Lanfredi , Pritam Mukherjee , Ronald Summers

Acquiring high-quality annotations in medical imaging is usually a costly process. Automatic label extraction with natural language processing (NLP) has emerged as a promising workaround to bypass the need of expert annotation. Despite the…

Computation and Language · Computer Science 2019-05-08 Tobi Olatunji , Li Yao , Ben Covington , Alexander Rhodes , Anthony Upton

Large, labeled datasets have driven deep learning methods to achieve expert-level performance on a variety of medical imaging tasks. We present CheXpert, a large dataset that contains 224,316 chest radiographs of 65,240 patients. We design…

Chest radiographs are the most common diagnostic exam in emergency rooms and intensive care units today. Recently, a number of researchers have begun working on large chest X-ray datasets to develop deep learning models for recognition of a…

Computer Vision and Pattern Recognition · Computer Science 2020-11-20 Tanveer Syeda-Mahmood , Ph. D , K. C. L Wong , Ph. D , Joy T. Wu , M. D. , M. P. H , Ashutosh Jadhav , Ph. D , Orest Boyko , M. D. Ph. D

Although deep learning-based computer-aided diagnosis systems have recently achieved expert-level performance, developing a robust deep learning model requires large, high-quality data with manual annotation, which is expensive to obtain.…

Image and Video Processing · Electrical Eng. & Systems 2022-10-12 Sangjoon Park , Gwanghyun Kim , Yujin Oh , Joon Beom Seo , Sang Min Lee , Jin Hwan Kim , Sungjun Moon , Jae-Kwang Lim , Chang Min Park , Jong Chul Ye

Medical image datasets and their annotations are not growing as fast as their equivalents in the general domain. This makes translation from the newest, more data-intensive methods that have made a large impact on the vision field…

Computer Vision and Pattern Recognition · Computer Science 2022-10-14 Tom van Sonsbeek , Xiantong Zhen , Dwarikanath Mahapatra , Marcel Worring

The advancement of machine learning algorithms in medical image analysis requires the expansion of training datasets. A popular and cost-effective approach is automated annotation extraction from free-text medical reports, primarily due to…

Computer Vision and Pattern Recognition · Computer Science 2025-07-22 Veronika Cheplygina , Cathrine Damgaard , Trine Naja Eriksen , Dovile Juodelyte , Amelia Jiménez-Sánchez

Purpose: To develop high throughput multi-label annotators for body (chest, abdomen, and pelvis) Computed Tomography (CT) reports that can be applied across a variety of abnormalities, organs, and disease states. Approach: We used a…

In the field of medical image analysis, the scarcity of Chinese chest X-ray report datasets has hindered the development of technology for generating Chinese chest X-ray reports. On one hand, the construction of a Chinese chest X-ray report…

Machine Learning · Computer Science 2024-04-29 Mengwei Wang , Ruixin Yan , Zeyi Hou , Ning Lang , Xiuzhuang Zhou

The automatic generation of radiology reports given medical radiographs has significant potential to operationally and improve clinical patient care. A number of prior works have focused on this problem, employing advanced methods from…

Computer Vision and Pattern Recognition · Computer Science 2019-07-30 Guanxiong Liu , Tzu-Ming Harry Hsu , Matthew McDermott , Willie Boag , Wei-Hung Weng , Peter Szolovits , Marzyeh Ghassemi

Automated diagnostic assistants in healthcare necessitate accurate AI models that can be trained with limited labeled data, can cope with severe class imbalances and can support simultaneous prediction of multiple disease conditions. To…

Computer Vision and Pattern Recognition · Computer Science 2021-02-11 Deepta Rajan , Jayaraman J. Thiagarajan , Alexandros Karargyris , Satyananda Kashyap
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