English
Related papers

Related papers: Hyper-distance Oracles in Hypergraphs

200 papers

Protein-ligand binding prediction is central to virtual screening and affinity ranking, two fundamental tasks in drug discovery. While recent retrieval-based methods embed ligands and protein pockets into Euclidean space for…

Machine Learning · Computer Science 2025-11-25 Jianhui Wang , Wenyu Zhu , Bowen Gao , Xin Hong , Ya-Qin Zhang , Wei-Ying Ma , Yanyan Lan

Graph databases have been the subject of significant research and development. Problems such as modularity, centrality, alignment, and clustering have been formalized and solved in various application contexts. In this paper, we focus on…

Social and Information Networks · Computer Science 2019-08-09 Vikram Ravindra , Huda Nassar , David F. Gleich , Ananth Grama

Using geometric techniques like projection and dimensionality reduction, we show that there exists a randomized sub-linear time algorithm that can estimate the Hamming distance between two matrices. Consider two matrices ${\bf A}$ and ${\bf…

Data Structures and Algorithms · Computer Science 2021-07-07 Arijit Bishnu , Arijit Ghosh , Gopinath Mishra

Computing shortest distances is one of the fundamental problems on graphs, and remains a {\em challenging} task today. {\em Distance} {\em landmarks} have been recently studied for shortest distance queries with an auxiliary data structure,…

Databases · Computer Science 2014-01-14 Shuai Ma , Kaiyu Feng , Haixun Wang , Jianxin Li , Jinpeng Huai

Given an undirected, unweighted planar graph $G$ with $n$ vertices, we present a truly subquadratic size distance oracle for reporting exact shortest-path distances between any pair of vertices of $G$ in constant time. For any $\varepsilon…

Data Structures and Algorithms · Computer Science 2020-10-01 Viktor Fredslund-Hansen , Shay Mozes , Christian Wulff-Nilsen

We study distributed protocols for finding all pairs of similar vectors in a large dataset. Our results pertain to a variety of discrete metrics, and we give concrete instantiations for Hamming distance. In particular, we give improved…

Data Structures and Algorithms · Computer Science 2016-11-16 Paul Beame , Cyrus Rashtchian

Hypergraphs are a generalization of graphs in which edges can connect any number of vertices. They allow the modeling of complex networks with higher-order interactions, and their spectral theory studies the qualitative properties that can…

Combinatorics · Mathematics 2021-12-01 Raffaella Mulas

In this paper, we present and study the \emph{Hamming distance oracle problem}. In this problem, the task is to preprocess two strings $S$ and $T$ of lengths $n$ and $m$, respectively, to obtain a data-structure that is able to answer…

Data Structures and Algorithms · Computer Science 2024-07-09 Itai Boneh , Dvir Fried , Shay Golan , Matan Kraus

Extending community detection from pairwise networks to hypergraphs introduces fundamental theoretical challenges. Hypergraphs exhibit structural heterogeneity with no direct graph analogue: hyperedges of varying orders can connect nodes…

Social and Information Networks · Computer Science 2026-04-22 Jiaze Li , Michael T. Schaub , Leto Peel

The majority of Multi-Object Tracking (MOT) algorithms based on the tracking-by-detection scheme do not use higher order dependencies among objects or tracklets, which makes them less effective in handling complex scenarios. In this work,…

Computer Vision and Pattern Recognition · Computer Science 2018-12-11 Longyin Wen , Dawei Du , Shengkun Li , Xiao Bian , Siwei Lyu

Edge-labeled graphs are widely used to describe relationships between entities in a database. Given a query subgraph that represents an example of what the user is searching for, we study the problem of efficiently searching for similar…

Databases · Computer Science 2020-05-12 Zhaoyang Shao , Davood Rafiei , Themis Palpanas

A large number of applications such as querying sensor networks, and analyzing protein-protein interaction (PPI) networks, rely on mining uncertain graph and hypergraph databases. In this work we study the following problem: given an…

Data Structures and Algorithms · Computer Science 2018-01-11 Charalampos E. Tsourakakis , Shreyas Sekar , Johnson Lam , Liu Yang

Network representation learning has aroused widespread interests in recent years. While most of the existing methods deal with edges as pairwise relationships, only a few studies have been proposed for hyper-networks to capture more…

Social and Information Networks · Computer Science 2019-10-23 Jie Huang , Xin Liu , Yangqiu Song

Hyperbolicity is a graph parameter related to how much a graph resembles a tree with respect to distances. Its computation is challenging as the main approaches consist in scanning all quadruples of the graph or using fast matrix…

Discrete Mathematics · Computer Science 2021-11-23 David Coudert , André Nusser , Laurent Viennot

We consider approximate distance oracles for edge-weighted n-vertex undirected planar graphs. Given fixed epsilon > 0, we present a (1+epsilon)-approximate distance oracle with O(n(loglog n)^2) space and O((loglog n)^3) query time. This…

Data Structures and Algorithms · Computer Science 2016-01-06 Christian Wulff-Nilsen

Given an undirected weighted graph, an (approximate) distance oracle is a data structure that can (approximately) answer distance queries. A {\em Path-Reporting Distance Oracle}, or {\em PRDO}, is a distance oracle that must also return a…

Data Structures and Algorithms · Computer Science 2024-05-24 Ofer Neiman , Idan Shabat

Let $s$ denote a distinguished source vertex of a non-negatively real weighted and undirected graph $G$ with $n$ vertices and $m$ edges. In this paper we present two efficient \emph{single-source approximate-distance sensitivity oracles},…

Data Structures and Algorithms · Computer Science 2016-08-18 Davide Bilò , Luciano Gualà , Stefano Leucci , Guido Proietti

In this paper we consider aspects of geometric observability for hypergraphs, extending our earlier work from the uniform to the nonuniform case. Hypergraphs, a generalization of graphs, allow hyperedges to connect multiple nodes and…

Dynamical Systems · Mathematics 2024-04-12 Joshua Pickard , Cooper Stansbury , Amit Surana , Indika Rajapakse , Anthony Bloch

Graph representation learning for hypergraphs can be used to extract patterns among higher-order interactions that are critically important in many real world problems. Current approaches designed for hypergraphs, however, are unable to…

Machine Learning · Computer Science 2019-11-11 Ruochi Zhang , Yuesong Zou , Jian Ma

We present a dual fault-tolerant distance oracle for undirected and unweighted graphs. Given a set $F$ of two edges, as well as a source node $s$ and a destination node $t$, our oracle returns the length of the shortest path from $s$ to $t$…

Data Structures and Algorithms · Computer Science 2024-07-03 Dipan Dey , Manoj Gupta