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Hibernation is an adaptation to extreme environmental seasonality that has been studied for almost 200 years, but our understanding of the underlying physiological system remains lacking due to the partially observed nature of the system.…

Biological Physics · Physics 2026-03-12 Cody E. FitzGerald , Andrew J. Engedal , Niall M. Mangan

Epithelial cell tissues have a slow relaxation dynamics resembling that of supercooled liquids. Yet, they also have distinguishing features. These include an extended short-time sub-diffusive transient, as observed in some experiments and…

Soft Condensed Matter · Physics 2021-02-17 Yan-Wei Li , Leon Loh Yeong Wei , Matteo Paoluzzi , Massimo Pica Ciamarra

Filamentous bio-materials such as fibrin or collagen networks exhibit an enormous stiffening of their elastic moduli upon large deformations. This pronounced nonlinear behavior stems from a significant separation between the stiffnesses…

Soft Condensed Matter · Physics 2019-05-21 Robbie Rens , Carlos Villarroel , Gustavo Düring , Edan Lerner

Chiral active materials are abundant in nature, including the cytoskeleton with attached motor proteins, rotary clusters of bacteria flagella, and self-spinning starfish embryos. These materials break both time reversal and mirror-image…

Soft Condensed Matter · Physics 2025-10-17 Cheng-Tai Lee , Tom C. Lubensky , Tomer Markovich

The modeling of the beating of cilia and flagella in fluids is a particularly active field of study, given the biological relevance of these organelles. Various mathematical models have been proposed to represent the nonlinear dynamics of…

Soft Condensed Matter · Physics 2024-12-10 Irene Anello , François Alouges , Antonio De Simone

The mechanical properties of tissues play an essential role for all tissue properties such as cell division, and differentiation or morphogenesis. Here, we study theoretically the rheology of 2-dimensional epithelial tissues described by a…

Soft Condensed Matter · Physics 2023-12-18 Doron Grossman , Jean-Francois Joanny

Understanding how growth induces form is a longstanding biological question. Many studies concentrated on the shapes of plant cells, fungi or bacteria. Some others have shown the importance of the mechanical properties of bacterial walls…

Biological Physics · Physics 2007-05-23 Arezki Boudaoud

This thesis is about the study of complex systems through simple models. Our work evidences the relevance of this kind of modeling in science, which provides us with a better understanding of nature at minimum cost. The fundamentals tools…

Statistical Mechanics · Physics 2019-04-09 Carlos A. Plata

A living cell uses long tubular appendages for locomotion and sensory purposes. Hence, assembling and maintaining a protrusion of correct length is crucial for its survival and overall performance. Usually the protrusions lack the machinery…

Biological Physics · Physics 2022-11-10 Swayamshree Patra , Debashish Chowdhury , Frank Jülicher

Microbes are everywhere, including in and on our bodies, and have been shown to play key roles in a variety of prevalent human diseases. Consequently, there has been intense interest in the design of bacteriotherapies or "bugs as drugs,"…

Machine Learning · Statistics 2020-04-13 Travis E. Gibson , Georg K. Gerber

During embryonic morphogenesis, tissues undergo dramatic deformations in order to form functional organs. Similarly, in adult animals, living cells and tissues are continually subjected to forces and deformations. Therefore, the success of…

Soft Condensed Matter · Physics 2024-05-06 Michael J. Hertaeg , Suzanne M. Fielding , Dapeng Bi

Fungal protein materials exhibit inherently anisotropic microstructures formed by networks of hyphae, which suggest a natural pathway to replicate the fibrous texture of animal meat. We probe whether this structural anisotropy translates…

Computational Engineering, Finance, and Science · Computer Science 2026-04-20 Skyler R. St. Pierre , Thibault Vervenne , Ethan C. Darwin , Ellen Kuhl

We present a simple physical model that recapitulates several features of biological evolution, while being based only on thermally-driven attachment and detachment of elementary building blocks. Through its dynamics, this model samples a…

Populations and Evolution · Quantitative Biology 2025-07-11 Guy Bunin , Olivier Rivoire

A non-Hermitian system can exhibit extensive sensitivity of its complex energy spectrum to the imposed boundary conditions, which is beyond any known phenomenon from Hermitian systems. In addition to topologically protected boundary modes,…

Other Condensed Matter · Physics 2019-05-15 Ching Hua Lee , Ronny Thomale

We examine the budding of a nanoscale particle through a lipid bilayer using molecular dynamics simulations, free energy calculations, and an elastic theory, with the aim of determining the extent to which equilibrium elasticity theory can…

Subcellular Processes · Quantitative Biology 2012-02-22 Teresa Ruiz-Herrero , Enrique Velasco , Michael F. Hagan

One way of controlling friction and associated energy losses is to engineer a deterministic structural pattern on the surface of the rubbing parts (i.e., texture engineering). Custom texturing enhances the quality of lubrication, reduces…

Biological Physics · Physics 2012-10-01 Hisham A. Abdel-Aal

Solids built out of active components can exhibit non-reciprocal elastic coefficients that give rise to non-Hermitian wave phenomena. Here, we investigate non-Hermitian effects present at the boundary of two-dimensional active elastic media…

Soft Condensed Matter · Physics 2020-09-16 Colin Scheibner , William T. M. Irvine , Vincenzo Vitelli

Large deformations play a central role in the shape transformations of slender active and biological structures. A classical example is the eversion of the Volvox embryo, which demonstrates the need for shell theories that can describe…

Soft Condensed Matter · Physics 2026-03-18 Matteo Taffetani , Matteo Pezzulla

Cell--cell and cell-matrix adhesions play essential roles in the function of tissues. There is growing evidence for the importance of crosstalk between these two adhesion types, yet little is known about the impact of these interactions on…

Many morphogenetic processes involve mechanical rearrangement of epithelial tissues that is driven by precisely regulated cytoskeletal forces and cell adhesion. The mechanical state of the cell and intercellular adhesion are not only the…

Cell Behavior · Quantitative Biology 2015-06-03 Kevin K. Chiou , Lars Hufnagel , Boris I. Shraiman