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We define two words in a language to be connected if they express similar concepts. The network of connections among the many thousands of words that make up a language is important not only for the study of the structure and evolution of…

Disordered Systems and Neural Networks · Physics 2009-11-07 Adilson E. Motter , Alessandro P. S. de Moura , Ying-Cheng Lai , Partha Dasgupta

Real-world networks such as the Internet and WWW have many common traits. Until now, hundreds of models were proposed to characterize these traits for understanding the networks. Because different models used very different mechanisms, it…

Social and Information Networks · Computer Science 2014-09-02 Bojin Zheng , Hongrun Wu , Li Kuang , Jun Qin , Wenhua Du , Jianmin Wang , Deyi Li

Complex systems are successfully reduced to interacting elements via the network concept. Transport plays a key role in the survival of networks. For example the specialized signaling cascades of cellular networks filter noise and…

Biological Physics · Physics 2010-10-05 Robin Palotai , Peter Csermely

Recent research on network embedding in hyperbolic space have proven successful in several applications. However, nodes in real world networks tend to interact through several distinct channels. Simple aggregation or ignorance of this…

Social and Information Networks · Computer Science 2021-11-02 Peiyuan Sun

Cardiovascular networks span the body by branching across many generations of vessels. The resulting structure delivers blood over long distances to supply all cells with oxygen via the relatively short-range process of diffusion at the…

Medical Physics · Physics 2016-06-15 David Hunt , Van M. Savage

Comparative graph and network analysis play an important role in both systems biology and pattern recognition, but existing surveys on the topic have historically ignored or underserved one or the other of these fields. We present an…

Social and Information Networks · Computer Science 2019-05-17 Emily Evans , Marissa Graham

Complex networks are ubiquitous in nature and play a role of paramount importance in many contexts. Internet and the cyberworld, which permeate our everyday life, are self-organized hierarchical graphs. Urban traffic flows on intricate road…

Physics and Society · Physics 2014-08-08 Francesca Di Patti , Duccio Fanelli , Francesco Piazza

Many foraging microorganisms rely upon cellular transport networks to deliver nutrients, fluid and organelles between different parts of the organism. Networked organisms ranging from filamentous fungi to slime molds demonstrate a…

Adaptation and Self-Organizing Systems · Physics 2020-12-08 Cassidy Mentus , Marcus Roper

A typical complex system should be described by a supernetwork or a network of networks, in which the networks are coupled to some other networks. As the first step to understanding the complex systems on such more systematic level,…

Physics and Society · Physics 2015-05-20 Xiu-Lian Xu , Yan-Qin Qu , Shan Guan , Yu-Mei Jiang , Da-Ren He

The design of efficient transportation networks is an important challenge in many research areas. Among the most promising recent methods, biological routing mimic local rules found in nature. However comparisons with other methods are…

Physics and Society · Physics 2018-03-12 François Queyroi

Over the last two decades, network science has greatly advanced our understanding of how the collective behaviors of a complex system emerge from the interactions among its basic units. Multiplex networks, i.e. networks with many layers,…

The human brain has been studied at multiple scales, from neurons, circuits, areas with well defined anatomical and functional boundaries, to large-scale functional networks which mediate coherent cognition. In a recent work, we addressed…

Biological Physics · Physics 2012-05-17 Lazaros K. Gallos , Mariano Sigman , Hernan A. Makse

We currently witness the emergence of interesting new network topologies optimized towards the traffic matrices they serve, such as demand-aware datacenter interconnects (e.g., ProjecToR) and demand-aware overlay networks (e.g., SplayNets).…

Networking and Internet Architecture · Computer Science 2017-05-23 Chen Avin , Alexandr Hercules , Andreas Loukas , Stefan Schmid

A framework integrating information theory and network science is proposed, giving rise to a potentially new area. By incorporating and integrating concepts such as complexity, coding, topological projections and network dynamics, the…

Information Theory · Computer Science 2019-04-10 Henrique F. de Arruda , Filipi N. Silva , Cesar H. Comin , Diego R. Amancio , Luciano da F. Costa

Network inference, the task of reconstructing interactions in a complex system from experimental observables, is a central yet extremely challenging problem in systems biology. While much progress has been made in the last two decades,…

Quantitative Methods · Quantitative Biology 2024-09-12 Stephen Y Zhang

A new family of graphs, {\it entangled networks}, with optimal properties in many respects, is introduced. By definition, their topology is such that optimizes synchronizability for many dynamical processes. These networks are shown to have…

Statistical Mechanics · Physics 2009-11-11 Luca Donetti , Pablo I. Hurtado , Miguel A. Munoz

We analyse the flow of information in multiplex networks by means of the communicability function. First, we generalize this measure from its definition from simple graphs to multiplex networks. Then, we study its relevance for the analysis…

Physics and Society · Physics 2015-06-18 Ernesto Estrada , Jesus Gomez-Gardenes

The behavior of many complex systems is determined by a core of densely interconnected units. While many methods are available to identify the core of a network when connections between nodes are all of the same type, a principled approach…

Neurons and Cognition · Quantitative Biology 2018-09-14 Federico Battiston , Jeremy Guillon , Mario Chavez , Vito Latora , Fabrizio De Vico Fallani

Structural changes in a network representation of a system (e.g.,different experimental conditions, time evolution), can provide insight on its organization, function and on how it responds to external perturbations. The deeper…

Data Analysis, Statistics and Probability · Physics 2021-01-04 Leonardo L. Portes , Michael Small

Multiplex networks describe a large number of systems ranging from social networks to the brain. These multilayer structure encode information in their structure. This information can be extracted by measuring the correlations present in…

Disordered Systems and Neural Networks · Physics 2015-04-23 Giulia Menichetti , Daniel Remondini , Ginestra Bianconi