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Real-world networks are often complex and large with millions of nodes, posing a great challenge for analysts to quickly see the big picture for more productive subsequent analysis. We aim at facilitating exploration of node-attributed…

Social and Information Networks · Computer Science 2015-12-21 Jia Wang , Kevin Chen-Chuan Chang , Hari Sundaram

Interconnected ensembles of biological entities are perhaps some of the most complex systems that modern science has encountered so far. In particular, scientists have concentrated on understanding how the complexity of the interacting…

Pattern Formation and Solitons · Physics 2020-11-18 Bram A. Siebert , Cameron L. Hall , James P. Gleeson , Malbor Asllani

Modeling and topological analysis of networks in biological and other complex systems, must venture beyond the limited consideration of very few network metrics like degree, betweenness or assortativity. A proper identification of…

Quantitative Methods · Quantitative Biology 2012-09-25 Soumen Roy

Understanding the mechanisms of neural communication in large-scale brain networks remains a major goal in neuroscience. We investigated whether navigation is a parsimonious routing model for connectomics. Navigating a network involves…

Neurons and Cognition · Quantitative Biology 2018-06-05 Caio Seguin , Martijn P. van den Heuvel , Andrew Zalesky

It is well-known that biological and social interaction networks have a varying degree of redundancy, though a consensus of the precise cause of this is so far lacking. In this paper, we introduce a topological redundancy measure for…

Networks are ubiquitous structure that describes complex relationships between different entities in the real world. As a critical component of prediction task over nodes in networks, learning the feature representation of nodes has become…

Machine Learning · Computer Science 2018-09-10 Hansheng Xue , Jiajie Peng , Xuequn Shang

Networks are important representations in computer science to communicate structural aspects of a given system of interacting components. The evolution of a network has several topological properties that can provide us information on the…

Social and Information Networks · Computer Science 2020-04-30 Joao Pita Costa , Tihana Galinac Grbac

Complex systems are large collections of entities that organize themselves into non-trivial structures that can be represented by networks. A key emergent property of such systems is robustness against random failures or targeted attacks…

Physics and Society · Physics 2021-06-14 Arsham Ghavasieh , Massimo Stella , Jacob Biamonte , Manlio De Domenico

Network theory provides tools which are particularly appropriate for assessing the complex interdependencies that characterise our modern connected world. This article presents an introduction to network theory, in a way that doesn't…

Physics and Society · Physics 2020-05-01 Vaiva Vasiliauskaite , Fernando E. Rosas

The structure of networks that provide optimal transport properties has been investigated in a variety of contexts. While many different formulations of this problem have been considered, it is recurrently found that optimal networks are…

Biological Physics · Physics 2015-05-13 Francis Corson

Synchronization, in which individual dynamical units keep in pace with each other in a decentralized fashion, depends both on the dynamical units and on the properties of the interaction network. Yet, the role played by the network has…

Disordered Systems and Neural Networks · Physics 2010-06-15 Takashi Nishikawa , Adilson E. Motter

As networks grow in size and complexity, backbones become an essential network representation. Indeed, they provide a simplified yet informative overview of the underlying organization by retaining the most significant and structurally…

Social and Information Networks · Computer Science 2024-07-30 Sanaa Hmaida , Hocine Cherifi , Mohammed El Hassouni

Modeling complex systems that consist of different types of objects leads to multilayer networks, in which vertices are connected by both inter-layer and intra-layer edges. In this paper, we investigate multiplex networks, in which vertices…

Numerical Analysis · Mathematics 2023-08-21 Silvia Noschese , Lothar Reichel

The mathematical framework of multiplex networks has been increasingly realized as a more suitable framework for modelling real-world complex systems. In this work, we investigate the optimization of synchronizability in multiplex networks…

Adaptation and Self-Organizing Systems · Physics 2017-05-24 Sanjiv K. Dwivedi , Murilo S. Baptista , Sarika Jalan

In physics, biology and engineering, network systems abound. How does the connectivity of a network system combine with the behavior of its individual components to determine its collective function? We approach this question for networks…

Neurons and Cognition · Quantitative Biology 2018-12-19 Yu Hu , Steven L. Brunton , Nicholas Cain , Stefan Mihalas , J. Nathan Kutz , Eric Shea-Brown

Quantifying which neurons are important with respect to the classification decision of a trained neural network is essential for understanding their inner workings. Previous work primarily attributed importance to individual neurons. In…

Machine Learning · Computer Science 2022-11-09 Kenzo Clauw , Sebastiano Stramaglia , Daniele Marinazzo

In both natural and engineered systems, communication often occurs dynamically over networks ranging from highly structured grids to largely disordered graphs. To use, or comprehend the use of, networks as efficient communication media…

Physics and Society · Physics 2020-03-17 Giacomo Baggio , Virginia Rutten , Guillaume Hennequin , Sandro Zampieri

In this paper we quantify our limited information horizon, by measuring the information necessary to locate specific nodes in a network. To investigate different ways to overcome this horizon, and the interplay between communication and…

Disordered Systems and Neural Networks · Physics 2015-06-25 M. Rosvall , K. Sneppen

The study of neuronal morphology is important not only for its potential relationship with neuronal dynamics, but also as a means to classify diverse types of cells and compare than among species, organs, and conditions. In the present…

Neurons and Cognition · Quantitative Biology 2024-03-11 Alexandre Benatti , Henrique F. de Arruda , Luciano da F. Costa

Inspired by studies on the airports' network and the physical Internet, we propose a general model of weighted networks via an optimization principle. The topology of the optimal network turns out to be a spanning tree that minimizes a…

Physics and Society · Physics 2009-11-11 Marc Barthelemy , Alessandro Flammini